FC930999

Overview
NameFC930999
Unique NameFC930999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.309e-123
Identity = 200/227 (88.11%), Postives = 214/227 (94.27%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            WQ+AH+TFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNG+SCGACFELKC  DPQWC+ G+P+ILITATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+AQYRAGIVPVSYRRVPCRKRGGIRFTING RYFNLVL+TNVAGAGDIVR SVKG+ T W+S+SRNWGQNWQSNA LVGQALSFRVTGSDRRTSTSWN+ P+NWQFGQTF GKNFRV
Sbjct:   31 WQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 439.884 bits (1130), Expect = 6.494e-123
Identity = 196/227 (86.34%), Postives = 216/227 (95.15%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            W++AH+TFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFELKC  DP+WC+ G+P+I ITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLK+A+YRAGIVPVS+RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG+IVR+ VKG +T W++MSRNWGQNWQSN+ LVGQ+LSFRVT SDRR+STSWN+APANW+FGQTF GKNFRV
Sbjct:   31 WETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 3.563e-121
Identity = 197/227 (86.78%), Postives = 211/227 (92.95%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            WQ+AH+TFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFE+KC  DP+WC PGNP+IL+TATNFCPPNFAQPSD+GGWCNPPR HFDLAMPMFLK+  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI  VSVKG+ T W+ MSRNWGQNWQSNA L+GQ+LSFRVT SDRR+STSWNVAPA WQFGQTFSGKNFRV
Sbjct:   36 WQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 6.720e-120
Identity = 195/229 (85.15%), Postives = 211/229 (92.14%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            WQSAH+TFYGGSDASGTMGGACGYGNLYSQGYGVN AALSTALFN+G SCGACFE+KC   P  +WC+PG+P+ILITATNFCPPN+A PSDNGGWCNPPRPHFDLAMPMFL +A+YRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVL+TNVAGAGDIVR SVKG +T W+ MSRNWGQNWQSN+ LVGQALSFRVTGSDRRTSTSWN APA W FGQTF GKNFRV
Sbjct:   36 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 2.162e-118
Identity = 187/227 (82.38%), Postives = 210/227 (92.51%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            WQ+AH+TFYGG+DASGTMGGACGYGNLYSQGYG NTAALST+LFN+G SCGACFE+KC  DP+WC+PGNP++ +TATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+A+YRAGIVP+SYRRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R SVKG+ T W+S++RNWGQNWQSNA LVGQ+LSFRVT SDRRTSTSWN+AP+NWQFGQTF GKNFRV
Sbjct:   34 WQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 5.325e-117
Identity = 190/227 (83.70%), Postives = 211/227 (92.95%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 682
            W +AH+TFYG +DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCG+CFELKC  DP WC PGNP+ILITATNFCPPNF Q SDNGGWCNPPR HFDLAMPMFL +A+Y+AGIVPVSYRR+PCRK+GGIRFTINGF+YFNLVLVTNVAGAGD+++VSVKG+NTQWL +SRNWGQNWQSNA LVGQ+LSFRV  SD R+STS N+AP+NWQFGQT+SGKNFRV
Sbjct:   32 WINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 367.081 bits (941), Expect = 5.350e-101
Identity = 168/226 (74.34%), Postives = 191/226 (84.51%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 679
            W +AH+TFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE+KC  D  WC PG  AI++TATNFCPPN A P++ GGWCNPP  HFDL+ P+F ++AQY+AG+VPVSYRRVPC +RGGIRFTING  YFNLVLVTNV GAGD+  V+VKG+ T+W  MSRNWGQNWQSN  L GQALSF+VT SD RT  S N+APA+W FGQTF+G+ FR
Sbjct:   30 WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPG--AIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 3.468e-100
Identity = 164/226 (72.57%), Postives = 190/226 (84.07%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 679
            W +A +TFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN G SCGACF++KC  DP+WC  G   I +T TNFCPPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING  YFNLVL+TNVAGAGD++ VS+KG NT+W SMSRNWGQNWQSNA+L GQALSF+VT SD RT  S N  P NW FGQT++GK FR
Sbjct:   29 WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 3.834e-99
Identity = 163/226 (72.12%), Postives = 190/226 (84.07%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 679
            W +AH+TFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFNNGLSCG+CFE++C  D +WC PG+  I++TATNFCPPN A  ++NGGWCNPP  HFDLA P+F ++AQYRAGIVPVSYRRVPCR+RGGIRFTING  YFNLVL+TNV GAGD+   ++KG+ T W +MSRNWGQNWQSN+ L GQALSF+VT SD RT  S+N APA W +GQTF+G  FR
Sbjct:   26 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGS--IVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249          
BLAST of FC930999 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 359.377 bits (921), Expect = 1.115e-98
Identity = 163/225 (72.44%), Postives = 186/225 (82.67%), Query Frame = 2
Query:    2 WQSAHSTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 676
            WQSAH+TFYGG DASGTMGGACGYGNLYS GYG NTAALST LFN+G +CG+C+EL+C  D QWC PG+  + +TATN CPPN+A P+D+GGWCNPPRPHFD+A P FL++  YRAGIVPVSYRRVPC K+GGIRFTING  YFNLVLVTNVAG GD+  VS+KG++T W  MSRNWGQNWQSN+ L GQ+LSF+V  SD RT TS NV PA WQFGQTF G  F
Sbjct:   29 WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGS--VTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251          
The following BLAST results are available for this feature:
BLAST of FC930999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
EXPA4_ARATH1.309e-12388.11Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA6_ARATH6.494e-12386.34Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA3_ARATH3.563e-12186.78Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA7_ORYSJ6.720e-12085.15Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ARATH2.162e-11882.38Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA9_ARATH5.325e-11783.70Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXP15_ARATH5.350e-10174.34Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP14_ARATH3.468e-10072.57Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXP10_ARATH3.834e-9972.12Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA2_ORYSJ1.115e-9872.44Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionC34100C11EF PostHarvP1 Citrus clementina cDNA clone C34100C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930999 ID=FC930999; Name=FC930999; organism=Citrus clementina; type=EST; length=719bp
CTGGCAATCGGCCCACTCCACTTTTTACGGTGGCAGCGACGCTTCCGGCA
CTATGGGTGGTGCTTGTGGGTACGGGAATCTGTACAGCCAGGGCTATGGA
GTGAACACGGCGGCTCTCAGTACGGCGCTGTTCAACAACGGCTTGAGCTG
CGGCGCGTGCTTCGAGTTAAAGTGCGGCGGCGACCCGCAATGGTGTAACC
CGGGTAACCCGGCCATTCTGATCACGGCGACCAACTTTTGCCCCCCGAAC
TTCGCTCAGCCCTCCGATAATGGCGGGTGGTGCAACCCTCCTCGCCCTCA
TTTCGATCTGGCCATGCCTATGTTCCTCAAGCTCGCCCAGTACCGCGCTG
GTATCGTCCCCGTTTCTTACCGCAGGGTGCCCTGCAGAAAGCGAGGCGGA
ATCAGATTCACAATTAACGGTTTCCGTTACTTCAACTTGGTCTTGGTCAC
CAACGTCGCGGGCGCAGGGGATATCGTGCGCGTGAGCGTGAAAGGGGCCA
ACACCCAATGGCTGAGCATGAGCCGCAACTGGGGACAAAACTGGCAATCC
AACGCTCAGCTCGTGGGCCAGGCACTTTCGTTTAGAGTCACGGGCAGTGA
CAGAAGGACCTCAACCTCTTGGAACGTGGCGCCAGCGAATTGGCAGTTCG
GTCAAACCTTTTCGGGAAAGAATTTCCGCGTCTAGTGATATTTAATCTTT
TTTCACATTTTCATGTTTC
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