FC931009

Overview
NameFC931009
Unique NameFC931009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931009 vs. ExPASy Swiss-Prot
Match: C2D61_ARATH (C2 domain-containing protein At1g53590 OS=Arabidopsis thaliana GN=NTMC2T6.1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35
Identity = 103/259 (39.77%), Postives = 138/259 (53.28%), Query Frame = 3 
Query:    3 GSEVSQTWEPRKGKNRRLDTLVRRVPNGSFNSTXXXXXXXXXXXXXXXXXXQEGKN----SIRRGLRKIGSMFQRNSRKEDHA-GSIGEAVPS--PRANLRAVNTKDVGVKFIVEDSLSGSIPVKATKDINVSSDGSGPESPSRGHVKGMAKSIMKHAEKHARSIKHAFSRKDSTKCQGG-TSLVTERELYVDYDSSDDESLPS--SRLERIPDFPIPMSSCSTRDDNCDTKEQIMRTSSSDPEADILGQTDKVSADSE 749
            G+EVSQ WEPRKGK+RRLD+ ++R PN    S                   QEG      S+ RGLRKIGSMF RN +KE+   GSI E   S  PR NL+AVN KDVG+ FIV+D+LSG +  K+    ++ ++    E+  +GH+K +AKS +K AEK A+ IKHAFSRK S K + G   +V E +   D +SSDD+   +    L   P       +     D+       + T+  D   DIL  +  V A  E
Sbjct:  464 GAEVSQIWEPRKGKSRRLDSQIQRTPNDESLSNGSSSTDDN----------QEGSKNPMKSVGRGLRKIGSMFHRNVKKEEFLIGSIEEESQSQSPRINLKAVNQKDVGLNFIVDDNLSGPLSGKSLDGESLDAE----ENSGKGHMKDVAKSFLKQAEKSAKQIKHAFSRKGSMKPRDGHKEIVPESDSGTDSESSDDDDAFTYVKNLATEPGKLTRDGNIERTGDDDHVDSTTLATAKEDSSGDILEDSTDVEAKEE 708
The following BLAST results are available for this feature:
BLAST of FC931009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C2D61_ARATH1.893e-3539.77C2 domain-containing protein At1g53590 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC34100D09EF PostHarvP1 Citrus clementina cDNA clone C34100D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931009 ID=FC931009; Name=FC931009; organism=Citrus clementina; type=EST; length=750bp
CAGGAAGTGAAGTATCTCAGACATGGGAGCCTAGAAAGGGTAAGAACAGG
CGCTTGGATACCCTGGTCCGCAGAGTGCCTAATGGTTCCTTTAACAGTAC
CAATTCTGCCGCATCTGGATCCTTGAACAATGACAGCAGCAGCACTGATG
ATAATCAGGAGGGCAAAAATTCAATAAGACGGGGCCTACGGAAGATTGGT
TCTATGTTTCAGAGGAATTCTAGAAAGGAAGATCATGCAGGAAGCATTGG
AGAGGCTGTTCCTTCTCCACGTGCCAACCTTAGAGCAGTCAATACAAAGG
ACGTTGGTGTGAAGTTCATAGTGGAAGACAGCCTTTCAGGGTCTATTCCT
GTTAAGGCTACAAAAGATATAAATGTGAGTTCGGACGGAAGTGGTCCAGA
AAGTCCTAGCAGGGGACATGTGAAAGGGATGGCAAAGAGCATCATGAAAC
ATGCTGAGAAACATGCTCGCAGCATAAAACATGCCTTTTCTCGGAAAGAT
TCAACAAAGTGTCAAGGAGGTACATCACTGGTGACAGAACGAGAACTTTA
TGTGGATTATGATTCCTCTGATGATGAATCTCTTCCATCCTCTAGACTTG
AAAGGATTCCTGATTTTCCCATTCCCATGAGCTCCTGTTCCACTAGAGAT
GACAACTGTGATACCAAGGAACAGATCATGCGGACAAGTTCAAGTGATCC
TGAAGCAGACATATTAGGCCAAACAGATAAAGTGAGTGCTGATAGTGAGG
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