FC931061

Overview
NameFC931061
Unique NameFC931061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.267e-69
Identity = 129/169 (76.33%), Postives = 143/169 (84.62%), Query Frame = 3
Query:  201 RRSSVNRGY-STVATTKCAASDPDQLKST-----------FCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            R +SVNR + ST A TK ++SDPDQLK+            FCHPILVRLGWHDAGTY+KNI+EWP+RGGAN SLRF++ELKHAANAGLVNAL LI+ IK+KYSG++YADLFQLASATAIEEAGGPKIPMKYGRVD SGPE CPEEGRLP AGPPSPA HLR VFYRMGL
Sbjct:   82 RIASVNRSFNSTTAATKSSSSDPDQLKNAREDIKELLSTKFCHPILVRLGWHDAGTYNKNIKEWPQRGGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLPDAGPPSPATHLREVFYRMGL 250          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 5.886e-67
Identity = 123/171 (71.93%), Postives = 139/171 (81.29%), Query Frame = 3
Query:  192 ISQRRSSVNRGYSTVATTKCAASDPDQL-----------KSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            + Q++  +N   + + + KCAASD  QL           ++ FCHPILVRLGWHDAGTY+KNIEEWP RGGAN SLRFE ELKHAANAGL+NALKLIQP+KDKY  ++YADLFQLASATAIEEAGGP IPMKYGRVDV  PEQCPEEGRLP AGPPSPA+HLR+VFYRMGL
Sbjct:   59 VLQKKHPINGTSTRMISPKCAASDAAQLISAKEDIKVLLRTKFCHPILVRLGWHDAGTYNKNIEEWPLRGGANGSLRFEAELKHAANAGLLNALKLIQPLKDKYPNISYADLFQLASATAIEEAGGPDIPMKYGRVDVVAPEQCPEEGRLPDAGPPSPADHLRDVFYRMGL 229          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.311e-66
Identity = 126/156 (80.77%), Postives = 132/156 (84.62%), Query Frame = 3
Query:  207 SSVNRGYSTVATTKCAASDPDQL-KSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            SS        A  + A  D  QL KST CHPILVRLGWHDAGTYDKNI EWP+ GGAN SLRFE+ELKHAANAGLVNALKLIQPIKDK++GVTYADLFQLASATAIEEAGGPKIPM YGRVDV+ PEQCP EGRLPAAGPPSPAEHLR VFYRMGL
Sbjct:   31 SSAAAAGDAAAELRGAREDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGL 186          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.039e-63
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 3
Query:  228 STVATTKCAASD-PDQLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            S  A  K A  D  + LK+T CHPILVRLGWHD+GTYDKNI+EWP+RGGAN SLRF+VELKH ANAGLVNALKL+QPIKDKY  ++YADLFQLASATAIEEAGGPKIPM YGR+DV+GPEQCP EG+LP AGP +PA+HLR VFYRMGL
Sbjct:   87 SGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGL 235          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 5.156e-63
Identity = 117/157 (74.52%), Postives = 128/157 (81.53%), Query Frame = 3
Query:  234 VATTKCAASDPDQLKS-----------TFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            +A    AASD  QLKS           T+CHPI+VRLGWHD+GTYDKNIEEWP+RGGA+ SLRF+ EL H ANAGL+NALKLIQPIKDKY G+TYADLFQLASATAIEEAGGPKIPMKYGRVDV+  EQCP EGRLP AGP  PA+HLR VFYRMGL
Sbjct:   78 MAAAAVAASDAAQLKSAREDIREILKTTYCHPIMVRLGWHDSGTYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVFYRMGL 234          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.453e-57
Identity = 111/146 (76.03%), Postives = 119/146 (81.51%), Query Frame = 3
Query:  237 ATTKCAASDPDQL-KSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            A  + A  D  QL KS  CHPILVRLGWHDAGTYDKNI EWP+ GGAN SLRF VEL HAAN GL+ AL L+ PIK KY+GVTYAD+FQLASATAIEEAGGPKIPM YGR DV+  E+CP EGRLPAA PPSPAEHLR VFYRMGL
Sbjct:   52 AELRAAREDVRQLLKSNPCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFGVELVHAANKGLLKALFLVIPIKSKYAGVTYADIFQLASATAIEEAGGPKIPMIYGRADVADGEECPPEGRLPAADPPSPAEHLREVFYRMGL 197          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29
Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = 3
Query:  273 LKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            + S  C PI++RL WHDAGTYD N     + GGAN S+R+E E  H +NAGL  A+ L++PIK K   +TYADL+QLA   A+E  GGP +    GR D S    CP EGRLP A     A HLR++FYRMGL
Sbjct:   25 ISSKGCAPIMLRLAWHDAGTYDVNT----KTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSS---VCPREGRLPDA--KKGALHLRDIFYRMGL 148          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29
Identity = 70/133 (52.63%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  273 LKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            + S  C PI++RL WHDAGTYDK      + GG N S+RF  E  HAANAG+  A+ L++P+K K+  +TYADL+QLA   A+E  GGP I    GR D S     PEEGRLP A     A HLR VFYRMGL
Sbjct:   26 IASKSCAPIMLRLAWHDAGTYDKAT----KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSS---DSPEEGRLPDA--KKGAAHLREVFYRMGL 149          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.085e-28
Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  273 LKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            + S  C PI++RL WHDAGTYDK      + GG N S+RF  E  HAANAG+  A+ L++P+K ++  +TYADL+QLA   A+E  GGP I    GR D S     PEEGRLP A     A HLR VFYRMGL
Sbjct:   26 IASKSCAPIMLRLAWHDAGTYDKAT----KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSS---DSPEEGRLPDA--KKGAAHLREVFYRMGL 149          
BLAST of FC931061 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26
Identity = 65/128 (50.78%), Postives = 79/128 (61.72%), Query Frame = 3
Query:  288 CHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGL 671
            C PI++RL WHDAGTYD       + GG N S+R E E  H AN+GL  AL L + +K K+  +TYADL+QLA   A+E  GGP I    GR D      CP+EGRLP A      +HLR+VFYRMGL
Sbjct:   30 CAPIMLRLAWHDAGTYDAQ----SKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKD---SNVCPKEGRLPDA--KQGFQHLRDVFYRMGL 148          
The following BLAST results are available for this feature:
BLAST of FC931061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
APXS_ARATH1.267e-6976.33L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APXT_ARATH5.886e-6771.93L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX6_ORYSJ1.311e-6680.77Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APX7_ORYSJ1.039e-6377.18Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX8_ORYSJ5.156e-6374.52Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX5_ORYSJ1.453e-5776.03Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APX4_ORYSJ4.871e-2951.88Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ4.871e-2952.63Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI1.085e-2851.88Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ARATH6.583e-2650.78L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC34101A03EF PostHarvP1 Citrus clementina cDNA clone C34101A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931061 ID=FC931061; Name=FC931061; organism=Citrus clementina; type=EST; length=676bp
CAGATACGACTGCAATCAAATCACAATCACCGATGGCTTCCTCTTTGAGC
ACCGCCGCTTCTTCTCGCCTTCTTTGCTCCACCACCGCCGCCGCCGCCGC
AGCTGCTAAGCTTTCTTTCTCTTCCGCTTCTTCACTCTCTTTCTCTCTCT
CCTCCTCTTCCTCCCTCAAATGCCTCAGATTCTCTCCTCTCATCAGCCAG
AGGAGATCGTCTGTGAACAGAGGATATAGCACCGTAGCTACGACGAAATG
TGCGGCGTCGGATCCTGATCAGTTGAAGTCTACATTTTGCCATCCTATTT
TGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAG
GAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGA
GCTAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTGAAACTGATTC
AACCTATCAAGGACAAATATTCCGGTGTCACATATGCTGACTTATTCCAG
TTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTAAGATCCCAAT
GAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCTGAAGAAG
GAAGGCTTCCCGCTGCTGGGCCTCCATCACCTGCTGAACATTTAAGAAAT
GTCTTTTATAGAATGGGATTAATGAC
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