FC931111

Overview
NameFC931111
Unique NameFC931111
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14317 contig Ccv1_Contig14317:108..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: Y1280_ARATH (Uncharacterized protein At1g22800 OS=Arabidopsis thaliana GN=At1g22800 PE=2 SV=2)

HSP 1 Score: 351.673 bits (901), Expect = 2.307e-96
Identity = 174/213 (81.69%), Postives = 195/213 (91.55%), Query Frame = 2
Query:   80 RDRAAWLTRP-NDSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            RDRAAWL+R  NDSFVDAVA+NLLDRLEDC+K+FPTA CLGGSL AV+RLLRGRGGIEKLIMMDTSYDM+K C+DAQ D+ +++IET + VGDEEFLP+KESS+DL IS LGLHWTNDLPG+MIQCKLALKPDGLFL AILGGETLKELRIACT+A MEREGGISPR+SPLAQVRDAGNLLTRAGF+LP VDVD+Y VK   A++LIEHLRAM
Sbjct:   65 RDRAAWLSRQKNDSFVDAVADNLLDRLEDCKKSFPTAFCLGGSLGAVKRLLRGRGGIEKLIMMDTSYDMIKSCRDAQDDSLDNSIETSYFVGDEEFLPVKESSVDLIISSLGLHWTNDLPGSMIQCKLALKPDGLFLAAILGGETLKELRIACTLAHMEREGGISPRLSPLAQVRDAGNLLTRAGFSLPGVDVDEYVVKYKRAMDLIEHLRAM 277          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_DANRE (Probable methyltransferase C20orf7 homolog, mitochondrial OS=Danio rerio GN=zgc:162919 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.683e-36
Identity = 83/201 (41.29%), Postives = 120/201 (59.70%), Query Frame = 2
Query:  113 DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            D   + V   + DR+ D  +TFP AL +G     +   L  +  +E+L + D S   L+  K +       +I    V+ DEEFLP KE++ DL +S L +HW NDLPGA+ Q    LKPDG+F+GA++GGETL ELR +  +A++EREGG +P +SP   V D GNLL +AGF + +VD+D+  V     LE++  L+ M
Sbjct:   49 DYLREEVGSRVADRVYDVARTFPLALDVGCGRSHIAEHL-SKEVVERLFLTDISSSSLRNRKTS-------DIPAQCVMADEEFLPFKENTFDLVLSSLSMHWINDLPGALRQIHQVLKPDGVFIGAMVGGETLYELRCSLQLAELEREGGFAPHISPYTAVTDLGNLLGQAGFNMLTVDIDEVQVNYPGMLEVMRDLQGM 241          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_HUMAN (Probable methyltransferase C20orf7, mitochondrial OS=Homo sapiens GN=C20orf7 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.504e-36
Identity = 88/217 (40.55%), Postives = 122/217 (56.22%), Query Frame = 2
Query:   77 QRDRAAWLTRPN--DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDT--SYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            Q++ AA    P   D   + V   + DR+ D  + FP AL LG           GRG I + +  +T   +    + ++A +++    I T  V+ DEEFLP KE++ DL +S L LHW NDLP A+ Q    LKPDG+F+GA+ GG+TL ELR +  +A+ EREGG SP +SP   V D G+LL RAGF   +VD D+  V      EL+E L+ M
Sbjct:   55 QKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGC----------GRGYIAQYLNKETIGKFFQADIAENALKNSSETEIPTVSVLADEEFLPFKENTFDLVVSSLSLHWVNDLPRALEQIHYILKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLQGM 261          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_PONAB (Probable methyltransferase C20orf7 homolog, mitochondrial OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.020e-35
Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 2
Query:   77 QRDRAAWLTRPN--DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDT--SYDMLKLCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            Q++ AA    P   D   + V   + DR+ D  + FP AL LG           GRG I + +  +T   +    + ++A +++    I T  V+ DEEFLP +E++ DL +S L LHW NDLP A+ Q    LKPDG+F+GA+ GG+TL ELR +  +A+ EREGG SP +SP   V D G+LL RAGF   +VD D+  V      EL+E L+ M
Sbjct:   55 QKNWAAQQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGC----------GRGYIAQYLNKETIGKFFQADIAENALKNSLETEIPTVSVLADEEFLPFRENTFDLVVSSLSLHWVNDLPRALEQIHYILKPDGVFIGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLQGM 261          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_MOUSE (Probable methyltransferase C20orf7 homolog, mitochondrial OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.511e-34
Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = 2
Query:  113 DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLK--LCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            D   + V   + DR+ D  + FP AL +G           GRG I + +  +T   + +  + + A +++   +I T  ++ DEEFLP +E++ DL +S L LHW NDLP A+ Q    LKPDG+F+GA+ GG+TL ELR +  +A+ EREGG SP +SP   V D G+LL RAGF   +VD D+  V      EL+E L+ M
Sbjct:   69 DYLKEEVGSRIADRVYDIARDFPLALDIGC----------GRGYIAQHLDKETVGKIFQTDIAEHALKNSLETDIPTVNILADEEFLPFQENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFVGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLKGM 261          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_RAT (Probable methyltransferase C20orf7 homolog, mitochondrial OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34
Identity = 80/203 (39.41%), Postives = 116/203 (57.14%), Query Frame = 2
Query:  113 DSFVDAVAENLLDRLEDCRKTFPTALCLGGSLEAVRRLLRGRGGIEKLIMMDTSYDMLK--LCKDAQQDAHNDNIETCFVVGDEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            D   + +   + DR+ D  + FP AL +G           GRG I + +  +T   + +  + + A +++   +I T  ++ DEEFLP  E++ DL +S L LHW NDLP A+ Q    LKPDG+F+GA+ GG+TL ELR +  +A+ EREGG SP +SP   V D G+LL RAGF   +VD D+  V      EL+E L+ M
Sbjct:   69 DYLKEEIGSRIADRVYDIARDFPLALDIGC----------GRGYIAQHLNKETVGKIFQTDIAEHALKNSIETDIPTVNILADEEFLPFPENTFDLVVSSLSLHWVNDLPRALEQIHYVLKPDGVFVGAMFGGDTLYELRCSLQLAETEREGGFSPHISPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLKGM 261          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: CT007_DICDI (Probable methyltransferase DDB_G0287769, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0287769 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.927e-26
Identity = 69/211 (32.70%), Postives = 124/211 (58.77%), Query Frame = 2
Query:  113 DSFVDAVAENLLDRLEDCRKT-FPTALCLGGSLEAVRRLLRGRGG-IEKLIMMDTSYDML-----KLCKDAQQDAHNDNIETCFVVG---DEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLRAM 715
            D  ++ VA+ L DR+ D +       L  G    A+ + ++ +G  I+K  M+++S ++L      + ++ + D +N+ ++   ++    +++   +++ SLDL IS L LHW NDLPG     K  LKP+G+FL ++ G +TL EL+ +  +A++EREGG SP VSP  ++ D GN+L++  +TLP+VD ++ T+   +   L+  L+ M
Sbjct:   57 DYLMNEVADRLADRILDIKDIKCGNVLDFGSRNGALFKYIQEKGAKIDKYYMVESSKELLYRDDNNVSQENEDDNNNNKVKPTKILVNSLEDKIEGIEDQSLDLIISNLSLHWVNDLPGVFGGLKRLLKPNGVFLASLFGEDTLMELKDSLYLAEIEREGGFSPHVSPFTKISDIGNILSKNRYTLPTVDTEKITINYDNMFVLMRDLQNM 267          
BLAST of FC931111 vs. ExPASy Swiss-Prot
Match: Y459_RICPR (Uncharacterized protein RP459 OS=Rickettsia prowazekii GN=RP459 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  353 DEEFLPLKESSLDLAISCLGLHWTNDLPGAMIQCKLALKPDGLFLGAILGGETLKELRIACTVAQMEREGGISPRVSPLAQVRDAGNLLTRAGFTLPSVDVDQYTVKXYSALELIEHLR 709
            D+E L  ++ S DL I  LGLHW ND+   +   +  LK DG+F+G  +GG++LK LR +    ++      SP +SP         LL  AGF+   VD +   +K  + + L++ ++
Sbjct:   54 DDENLEFQKDSFDLIIYSLGLHWINDVQRFLYNIRTFLKSDGIFIGNFVGGDSLKNLRKSLIDNEIASGFKHSPHISPFIHFDHVPMLLLHAGFSEVIVDYENIALKFENPIVLMKEIK 172          
The following BLAST results are available for this feature:
BLAST of FC931111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
Y1280_ARATH2.307e-9681.69Uncharacterized protein At1g22800 OS=Arabidopsis t... [more]
CT007_DANRE2.683e-3641.29Probable methyltransferase C20orf7 homolog, mitoch... [more]
CT007_HUMAN3.504e-3640.55Probable methyltransferase C20orf7, mitochondrial ... [more]
CT007_PONAB1.020e-3540.09Probable methyltransferase C20orf7 homolog, mitoch... [more]
CT007_MOUSE2.511e-3439.90Probable methyltransferase C20orf7 homolog, mitoch... [more]
CT007_RAT4.284e-3439.41Probable methyltransferase C20orf7 homolog, mitoch... [more]
CT007_DICDI1.927e-2632.70Probable methyltransferase DDB_G0287769, mitochond... [more]
Y459_RICPR4.609e-1232.77Uncharacterized protein RP459 OS=Rickettsia prowaz... [more]
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Properties
Property NameValue
Genbank descriptionC34101E11EF PostHarvP1 Citrus clementina cDNA clone C34101E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931111 ID=FC931111; Name=FC931111; organism=Citrus clementina; type=EST; length=715bp
GATGTGTTAATTGTATGATAAGTTTTAGGGTTTAGAGAGCCTCAGTATTA
GCTCTAATGTTAGTTGCTTCTGGTGGCAGCGGGATCGAGCTGCATGGTTG
ACGCGTCCAAATGACTCTTTTGTAGATGCTGTTGCAGAGAATCTATTAGA
TCGATTGGAGGATTGTAGGAAAACATTTCCTACGGCATTATGTTTAGGGG
GTTCTCTGGAGGCTGTAAGGCGATTGTTACGTGGCCGTGGTGGCATTGAA
AAGCTCATTATGATGGATACTTCATATGATATGCTGAAATTGTGTAAAGA
TGCTCAGCAGGATGCACATAATGATAACATTGAAACATGCTTTGTGGTTG
GGGACGAAGAATTTTTGCCTCTAAAAGAAAGTTCGCTAGATTTGGCGATC
AGTTGCTTGGGGCTTCATTGGACAAATGATCTCCCAGGGGCTATGATACA
GTGTAAATTGGCATTGAAGCCGGATGGCCTATTTTTAGGAGCTATTCTTG
GTGGAGAAACCTTGAAGGAACTGAGAATAGCTTGCACTGTTGCTCAAATG
GAGCGTGAAGGAGGCATCAGTCCACGGGTATCACCTTTGGCACAGGTGCG
TGATGCTGGTAATCTTTTGACCAGAGCAGGATTCACTCTTCCTAGTGTTG
ATGTTGATCAATACACTGTTAAANTATATAGCGCACTGGAGCTGATAGAA
CATCTGCGTGCGATG
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