FC931153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_MOUSE (Rhomboid family member 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.586e-13 Identity = 43/137 (31.39%), Postives = 64/137 (46.72%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ A G+LP +DNFAHI Sbjct: 638 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHI 774
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_RAT (Rhomboid family member 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12 Identity = 43/137 (31.39%), Postives = 64/137 (46.72%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ A G+LP +DNFAHI Sbjct: 638 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHI 774
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_DANRE (Rhomboid family member 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12 Identity = 43/137 (31.39%), Postives = 64/137 (46.72%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + I LE+ G++RI +Y+LSG G+L SA+F+ EL +W I A A L+ ++ A G+LP +DNFAHI Sbjct: 639 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFAHI 775
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_BOVIN (Rhomboid family member 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 43/137 (31.39%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH GV H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ G+LP +DNFAHI Sbjct: 638 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHI 774
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_PAPAN (Rhomboid family member 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ G+LP +DNFAHI Sbjct: 637 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHI 773
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_HUMAN (Rhomboid family member 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ G+LP +DNFAHI Sbjct: 637 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHI 773
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_CALMO (Rhomboid family member 1 OS=Callicebus moloch GN=RHBDF1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ G+LP +DNFAHI Sbjct: 637 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHI 773
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF1_CALJA (Rhomboid family member 1 OS=Callithrix jacchus GN=RHBDF1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 2 Query: 215 DKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 D G L Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+ ELF +W I A A L+ ++ G+LP +DNFAHI Sbjct: 637 DVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHI 773
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF2_XENTR (Rhomboid family member 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 260 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 Q +RL ++LH GV H +++ + + LE+ G++RI +Y+LSG G+L SALF+ ELF +W I A A L L+ I+ G+LP +DN AHI Sbjct: 623 QFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALFLPYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLPWIDNIAHI 744
BLAST of FC931153 vs. ExPASy Swiss-Prot
Match: RHDF2_HUMAN (Rhomboid family member 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 44/139 (31.65%), Postives = 65/139 (46.76%), Query Frame = 2 Query: 212 LDKM-GALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGIXXXXXXXXXXXXXXXXXELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHI 625 LDK+ G L Q +RL ++LH GV H L +++ + I LE+ G+ RI +++LSG G+L SA+F+ ELF +W + A L L I+ G+LP +DN AHI Sbjct: 636 LDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHI 774 The following BLAST results are available for this feature:
BLAST of FC931153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931153 ID=FC931153; Name=FC931153; organism=Citrus clementina; type=EST; length=727bpback to top |