FC931317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: TM87A_XENTR (Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33 Identity = 67/210 (31.90%), Postives = 125/210 (59.52%), Query Frame = 1 Query: 4 LGLFEIILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTIS-DISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYS 630 LG+ E ++++EY N +NTG+ + + + +++++L RLL+ VS+GYG+++P LG + +V+ +G YF+ + + + +G D+ L +P+A LD+ L WIF SL++T++ L+ +++++K +YR F+N L ++AS+I++ + W W+ A+W L F +L VI +LW PS N+QRYA++ Sbjct: 252 LGMLEKAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTLARLLVTIVSLGYGIIKPRLGAVMHRVVGMGVLYFVFAAVEGVMRIIGAKEYDLV----LLAGIPLALLDSGLCWWIFVSLAQTMKTLKLRKNTVKYSLYRHFTNTLIFAILASIIFMIWRTKKFQLVDCQADWMELWVDDAYWRFLFFIILLVIMFLWRPSANNQRYAFT 457
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: TM87A_MOUSE (Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33 Identity = 74/209 (35.41%), Postives = 119/209 (56.94%), Query Frame = 1 Query: 4 LGLFEIILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYS 630 LG+FE ++++E+ N G + AV++SL R L++ VS+GYG+V+P LG KV++ GA Y L S + + G +D++ A +P+AFLD L WIF SL++T++ L+ +R+ +KL +YR F+N L + V AS+++I + W+ W+ A W +L +L VI LW PS N+QR+A+S Sbjct: 268 LGMFEKAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMILWRPSANNQRFAFS 472
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: TM87B_MOUSE (Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 69/211 (32.70%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 4 LGLFEIILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLP---VAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAY 627 LG+ E +++SEY N N+TG+ + + + AV+++L RLL++ VS+GYG+V+P LG + +V+ LG Y + + + + +G G L +VL +A +D+ + +IF SL++T++ L+ +++++K +YR F+N L V+AS++++ + W W+ AFW L +L VI +LW PS N+QRYA+ Sbjct: 259 LGMLEKAVFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAIEGVMRVIG------GSKHLAVVLTDIVLAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFSVILIVIMFLWRPSANNQRYAF 463
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: TM87B_HUMAN (Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32 Identity = 68/211 (32.23%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 4 LGLFEIILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLP---VAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAY 627 LG+ E +++SEY N +NTG+ + + + A++++L RLL++ VS+GYG+V+P LG + +V+ LG Y + + + + +G G L +VL +A +D+ + +IF SL++T++ L+ +++++K +YR F N L V+AS++++ + W W+ AFW L +L VI +LW PS N+QRYA+ Sbjct: 258 LGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAVEGVMRVIG------GSNHLAVVLDDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAF 462
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: TM87A_HUMAN (Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 5.216e-32 Identity = 73/209 (34.93%), Postives = 118/209 (56.46%), Query Frame = 1 Query: 4 LGLFEIILWFSEYANFNNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCVICYLWAPSQNSQRYAYS 630 LG+ E ++++E+ N G + AV++SL R L++ VS+GYG+V+P LG KV++ GA Y L S + + G +D++ A +P+AFLD L WIF SL++T++ L+ +R+ +KL +YR F+N L + V AS+++I + W+ W+ A W +L +L VI LW PS N+QR+A+S Sbjct: 268 LGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLA----FIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFS 472
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: YEG7_SCHPO (Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe GN=SPAC26H5.07c PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 46/181 (25.41%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 106 AVRKSLTRLLILCVSMGYGVVRPTLGGLTSKVLLLGATYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAF-LILWIFTSLSKTLEQLQAKRSSIKLDIYRKFSNALAVTVIASVIWIAYEV----YFKATDPFNERWQSAWIIT-AFWDVLAFALLCVICYLWAPSQNSQRYAYS 630 + R+S L+L VS+GY +V P+LG L K +L F++S + F+ + S + PV + F + LWI +L+ T+ L+ ++ ++K +Y + + ++A +A + + + + W+ W + + D+L L+ I YLW P++N++R+A S Sbjct: 258 SARQSYFGFLLLIVSLGYSIVVPSLGSLLRKCQILAGLQFVSSCFFLSSLFISPSNKES--LVILFAAPVFLITLFAMFLWIVLALNNTIRDLRIRKQTVKAQMYTRLWIVICFGIVAYASIVAANAILIGIYGQMNYYLKYWKLLWFLNYGYTDILVLILMLTILYLWRPTENNRRFAMS 436
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: PTM1_YEAST (Membrane protein PTM1 OS=Saccharomyces cerevisiae GN=PTM1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 55/206 (26.70%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 52 NNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGG-LTSKVLLLGA-TYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILW--IFTSLSKTLEQLQAKRSSIKLDIYRK--------FSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCV-ICYLWAPSQNSQRYAYS 630 + GI+ ++ ++T G V S L+L +++GYG+V P L L + + GA TY + L ++D+ + L L+ + A +I + I S++KT+ L+ +R +KL++Y+K F + LA ++++S I++ D + W+S + +T FW L + ++ V I +LW P+ S A S Sbjct: 257 DTAGIKVYMVFLSILTAGKVTFSF--FLLLIIALGYGIVYPKLNKTLMRRCQMYGALTYAICIGFL----IQSYLTDMEAPSPLILITLIPMALALIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIVSSFIYVG----MNTIDMIEKNWRSRFFVTDFWPTLVYFIVFVTIAFLWRPTDTSYMLAAS 452
BLAST of FC931317 vs. ExPASy Swiss-Prot
Match: PTM1_YEAS7 (Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PTM1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 55/206 (26.70%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 52 NNTGIRPVVITTWVVTVGAVRKSLTRLLILCVSMGYGVVRPTLGG-LTSKVLLLGA-TYFLASELLDITEFVGTISDISGRARLFLVLPVAFLDAFLILW--IFTSLSKTLEQLQAKRSSIKLDIYRK--------FSNALAVTVIASVIWIAYEVYFKATDPFNERWQSAWIITAFWDVLAFALLCV-ICYLWAPSQNSQRYAYS 630 + GI+ ++ ++T G V S L+L +++GYG+V P L L + + GA TY + L ++D+ + L L+ + A +I + I S++KT+ L+ +R +KL++Y+K F + LA ++++S I++ D + W+S + +T FW L + ++ V I +LW P+ S A S Sbjct: 257 DTAGIKVYMVFLSILTAGKVTFSF--FLLLIIALGYGIVYPKLNKTLMRRCQMYGALTYAICIGFL----IQSYLTDMEAPSPLILITLIPMALALIIFYYMIIRSMTKTVIYLKEQRQIVKLNMYKKLLYIIYASFLSVLAGSIVSSFIYVG----MNTIDMIEKNWRSRFFVTDFWPTLVYFIVFVTIAFLWRPTDTSYMLAAS 452 The following BLAST results are available for this feature:
BLAST of FC931317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931317 ID=FC931317; Name=FC931317; organism=Citrus clementina; type=EST; length=710bpback to top |