FC931391

Overview
NameFC931391
Unique NameFC931391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15322 contig Ccv1_Contig15322:1..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.165e-44
Identity = 89/212 (41.98%), Postives = 133/212 (62.74%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGA-CPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQF-NPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            +MPF+I NE FEK+ + G   N+++YL   +       T ++ ++S  +NF  LLGAFLSD+Y GR+ T+  AS++SFLGM++L LTA + ++ P  C    +G+ C   T  QLA L++   L+ IG+GGIRPC+LAFGADQ  N      ++ + SFF WYY +   A++I+ T IVY+Q  + W  G G+PA +M ++  +  L S LY
Sbjct:   27 TMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLY 238          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42
Identity = 84/212 (39.62%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   98 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            WK+ PF++GNE  E+L   G + NL+ YLTT  +  +++A T +  + GT     L+GA L+D Y+GRY T+   S   F+GM  L+L+A++  L P +C       CP  TP Q A  F GL L+ +G GGI+PC  +FGADQF+      +    SFFNW+YF+     ++S +++V++Q +  W  G GIP   M L+ A  F G+ LY
Sbjct:   45 WKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGD---FCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLY 253          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.452e-40
Identity = 83/212 (39.15%), Postives = 123/212 (58.02%), Query Frame = 2
Query:   98 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            WK+  F++GNE  E+L   G  +NL+ YL +  N  + TA   +  +SGT     L+GAF++D Y GRY T+         GM +L+L+A++  L P   GN ++  C  P   Q A  F  L ++ +G GGI+PC  +FGADQF+ N E+ K   +SFFNW+YF+     +I+ TV+V++Q +V W WG G+P   M ++    F GSR Y
Sbjct:   28 WKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKP---GNCNADTCH-PNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFY 235          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.477e-40
Identity = 82/212 (38.68%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   98 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            WK+  F++G E  E+L   G S+NL+ YL    NM++++A+  ++ +SGT     L+GAF++D Y GRY T+    V    GM +L+++A++  L  P C  +   A  G T    A  F  L L+ +G GGI+PC  +FGADQF+   E  K+  +SFFNW+YF      MI+ +V+V++Q +V W WGLG+P   M ++    F GS  Y
Sbjct:   29 WKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGL-TPTCSGETCHATAGQT----AITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFY 235          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 77/212 (36.32%), Postives = 117/212 (55.19%), Query Frame = 2
Query:   98 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            WK+  FV+  E FE++   G SSNL++Y+TT  +  ++ ++  +  + GT+    +LGA+++D +FGRY T   +S    LGM +L+L+ ++  L PP C   +   C   +  QLA  F  L  + IG GG +P     GADQF+      K    SFFNW+ F+  F    + TV+VYVQ +V WA G G+    +  S  +  LG+RLY
Sbjct:   31 WKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34
Identity = 74/212 (34.91%), Postives = 113/212 (53.30%), Query Frame = 2
Query:   98 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            WK+  FV+  E FE++   G SSNL +Y+TT  +  ++ ++  +  + GT+    +LGA++ D   GRY T   +    F GM+VL+L+  I  + PP+C   +   C   +  QLA  F  L  + IG GG +P     GADQF+      K    SFFNW+ F+  F  + + TV+VYVQ +V W  G G+P   + +S  +  LG+  Y
Sbjct:   31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = 2
Query:   95 GWKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            GW S   ++  E  E+L T G   NL+ YLT   ++ + TA   +  F GT+    LLG F++DT+ GRY T+   +     G+ +L+L+  I  L PP C    S  C   +  QL  L+  L L  +G GG++     FG+DQF+      +  +T FFN ++F      ++++TV+VYVQ DV   WG GI AF + L+ ++   G+  Y
Sbjct:   30 GWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PEPT1_DROME (Peptide transporter family 1 OS=Drosophila melanogaster GN=yin PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 69/218 (31.65%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  101 KSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-------SWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            KS+ F+I NE  E+    G  + L++YLT        TAT L + F+       L+GA ++D + G+YKT+ + S+   LG +V+S                  GA P       A    GL L+ IG GGI+PC  AFG DQF+   +S +  +  FF+ +YF      +IS T    +++DV        ++   G+PA +M  S  +   G RLY
Sbjct:   34 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWLGKYKTILYLSLVYSLGAMVVSF-----------------GAVPLSGMPTKAVTVVGLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQ--LAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLY 232          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A2_HUMAN (Solute carrier family 15 member 2 OS=Homo sapiens GN=SLC15A2 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19
Identity = 59/218 (27.06%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP--GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L++Y     +    T+T++ + FS    F  +LGA ++D++ G++KT+ + S+   LG ++ SL                 GA P  G           GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y +     +IS  +   ++ DV       +A   G+P  +M ++  +  +GS++Y
Sbjct:   45 SIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVIKSL-----------------GALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFE---EKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A2_MOUSE (Solute carrier family 15 member 2 OS=Mus musculus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19
Identity = 61/218 (27.98%), Postives = 102/218 (46.79%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP--GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L +Y     +    T+T++ + FS    F  +LGA ++D++ G++KT+ + S+   LG +  SL                 GA P  G           GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y +     +IS  +   ++ DV       +A   GIP  +M L+  +  +GS++Y
Sbjct:   45 SIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVFKSL-----------------GAIPILGGKMLHTILSLVGLSLIALGTGGIKPCVAAFGGDQFE---EEHAEARTRYFSVFYLSINAGSLISTFITPMLRGDVKCFGEDCYALAFGIPGLLMVLALVVFAMGSKMY 242          
The following BLAST results are available for this feature:
BLAST of FC931391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PTR2X_ARATH2.165e-4441.98Probable peptide transporter At1g52190 OS=Arabidop... [more]
PTR2_ARATH1.552e-4239.62Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH1.452e-4039.15Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH2.477e-4038.68Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH4.093e-3536.32Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH3.465e-3434.91Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
CHL1_ARATH1.720e-3334.27Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PEPT1_DROME8.852e-2231.65Peptide transporter family 1 OS=Drosophila melanog... [more]
S15A2_HUMAN5.371e-1927.06Solute carrier family 15 member 2 OS=Homo sapiens ... [more]
S15A2_MOUSE9.161e-1927.98Solute carrier family 15 member 2 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC34104F04EF PostHarvP1 Citrus clementina cDNA clone C34104F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931391 ID=FC931391; Name=FC931391; organism=Citrus clementina; type=EST; length=737bp
GGGGAACTTTGAGCACTCTTTTCCAGACACCATGGAGAAGAACAGTAAGA
CAGCAGTTGTTGCGACAGATGATGAGCCTCAGCTCAACTACAGGGGATGG
AAATCAATGCCTTTTGTTATAGGAAATGAAACTTTTGAAAAGCTGGGGAC
TACTGGCACTTCCTCCAACCTCTTGGTATATTTGACAACCATATTCAACA
TGAAAAGTATCACGGCAACAACTCTCATTAACATCTTCAGTGGTACCACA
AATTTTGCCACCTTGCTCGGAGCATTCCTGTCCGATACTTACTTTGGCCG
GTACAAGACTCTGGGATTCGCTTCTGTTGCCTCTTTTCTGGGGATGCTTG
TACTTTCTTTGACAGCAGCAATCTCAAAACTGCACCCACCTGATTGTGGA
AATCAAGATTCTGGAGCGTGCCCTGGGCCAACACCATGGCAACTGGCTTT
TCTGTTCACTGGGCTAGGACTGATGGTAATTGGAGCTGGCGGCATTAGGC
CATGTAACTTGGCCTTTGGTGCTGACCAATTTAATCCCAATACTGAATCT
GGGAAGCAGGGAATCACCAGCTTCTTCAATTGGTACTACTTCACCTTCAC
CTTCGCGATGATGATATCTTTGACAGTCATTGTTTACGTGCAATCGGATG
TGAGCTGGGCCTGGGGATTGGGAATCCCTGCATTTATGATGTTCTTATCC
TGTGCAATGNTCTTCCTGGGATCTAGACTCTATGCGA
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