FC931437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.847e-62 Identity = 113/169 (66.86%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLR 596 RPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EKR R Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYR 241
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.342e-62 Identity = 112/169 (66.27%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLR 596 RPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYR 241
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 6.342e-62 Identity = 112/169 (66.27%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLR 596 RPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYR 241
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1A_RAT (Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus GN=Pcyt1a PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.946e-59 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKR 590 RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1A_HUMAN (Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.946e-59 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKR 590 RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1_SCHPO (Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1827.02c PE=1 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 3.847e-59 Identity = 109/169 (64.50%), Postives = 134/169 (79.29%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYA-DASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRL 593 RPVRVYADG++DLFH GH R LEQAKK FPN +L+VG ND+ TH+ KG TVM + ER E+LRHCKWVDEV+ +APWV+T EFL++H+IDFVAHD +PYA D SG D+Y VK GKF TKRT+G+STSD+I RI++DY+QYVMRNL RG +RK+L VS K+ L Sbjct: 100 RPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG---DIYLPVKKVGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKELNVSLFKKNEL 265
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1A_MOUSE (Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.847e-59 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKR 590 RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1A_CRIGR (Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus GN=PCYT1A PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58 Identity = 104/167 (62.28%), Postives = 133/167 (79.64%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKR 590 RPVRVYADGI+DLFH GHAR+L QAK FPNTY +VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY +S DVY+ +K AG F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1_YEAST (Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae GN=PCT1 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.727e-54 Identity = 93/168 (55.36%), Postives = 131/168 (77.98%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRL 593 RP+R+YADG++DLFH GH + LEQ KK+FPN L+VG +D+ THK KG TV+T+ +R E+L HC+WVDEV+P+APW VT EFL +H+ID+VAHD +PY A D+Y+ +K GKF T+RT+G+STSDII +I++DY++Y+MRN RG +R++L VS++K+ L Sbjct: 102 RPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVSAD--SDDIYKPIKEMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNEL 267
BLAST of FC931437 vs. ExPASy Swiss-Prot
Match: PCY1_CAEEL (Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis elegans GN=F08C6.2 PE=2 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 6.357e-54 Identity = 92/170 (54.12%), Postives = 127/170 (74.71%), Query Frame = 3 Query: 90 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRV 599 RPVR+YADGIYDLFH GHA L Q KK FPN YL+VG C D THK+KG+TV +E+ERY+ +RHC++VDEV +APW T EFL ++DF+AHD++PY + +D+YE + G F ET+RT+G+STSD++ RI++DY++YV RNL RGYS K+L V ++ + ++ Sbjct: 79 RPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPY--VAPGEEDLYEKFRREGMFLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQI 246 The following BLAST results are available for this feature:
BLAST of FC931437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931437 ID=FC931437; Name=FC931437; organism=Citrus clementina; type=EST; length=717bpback to top |