FC931445

Overview
NameFC931445
Unique NameFC931445
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length345
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6848 contig Ccv1_Contig6848:517..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931445 vs. ExPASy Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 3 
Query:  159 AWD--AFQNFTGCHPGDKMDGLAKLKKYFHYFGYIPDLPSNFTDDFDDMLESAVKTYQKNFNL 341
            AWD  A   FT  HPG    GL+ +K YFH+ GYIP+ P +F D+FDD L SA+KTYQKN+NL
Sbjct:   33 AWDGEATYKFTTYHPGQNYKGLSNVKNYFHHLGYIPNAP-HFDDNFDDTLVSAIKTYQKNYNL 94
The following BLAST results are available for this feature:
BLAST of FC931445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MEP1_SOYBN1.220e-1357.14Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionC34105B10EF PostHarvP1 Citrus clementina cDNA clone C34105B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931445 ID=FC931445; Name=FC931445; organism=Citrus clementina; type=EST; length=345bp
CCCAGCCAAACATCACACCCACATCGAAAATGAGATACCTTCTTCTTGTG
GCAACAGCAATTACAGTTCTATCACTGTCGCCCACTCAAACATCAGCTCA
TTTCTTCCCCAACATATCATCAATCCCCACATGGATACTCTCAAACGCCA
CCGCCAGCGCGTGGGACGCGTTTCAGAATTTCACCGGATGCCACCCCGGC
GACAAGATGGACGGCTTAGCCAAGCTCAAGAAGTACTTTCACTACTTCGG
TTACATTCCAGATTTGCCCTCGAATTTCACTGACGACTTCGACGACATGC
TCGAATCGGCAGTCAAAACTTATCAAAAGAACTTCAATCTGGAAA
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