FC931464

Overview
NameFC931464
Unique NameFC931464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.247e-79
Identity = 144/206 (69.90%), Postives = 171/206 (83.01%), Query Frame = 2
Query:   80 REDMANDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAA-GSRDIDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            RE+MA ++YE AIA L KLLSEK +L  +AAA++ QITA+L+++ GS+  DPVE MK GFI FKTEKYEKNP LYG L+KGQSPKF+VFACSDSRVCPSH+LNFQPGEAF+VRNIANMVP YD+ +YSG GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS+P +G+ ++ FIE+WV I   AK+KV+ E  D  F +QC  CEK
Sbjct:   62 REEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEK 267          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 9.464e-79
Identity = 142/205 (69.27%), Postives = 167/205 (81.46%), Query Frame = 2
Query:   89 MANDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSRD---IDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            M N++YEDAI  L KLL EK DL+ VAAAK+K+ITA+L+AA S D    DPVER+K GF+ FK EKYE NP LYG LAKGQSPK++VFACSDSRVCPSH+L+F PG+AF+VRNIANMVPP+D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WV IC  AKSKV  E    +FE+QC  CE+
Sbjct:    1 MGNESYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCER 205          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 3.976e-77
Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 2
Query:   83 EDMANDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSRD---IDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            E+M  +AY++AI  L KLL EK +L+ VAAAK++QITA L+   S D    DPVE +K GFI+FK EKYE NP LYG LAKGQSPK++VFACSDSRVCPSH+L+FQPG+AF+VRNIANMVPP+D+ KY G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WV IC  AKSKV  E+ D +FE+QC  CE+
Sbjct:   76 EEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCER 282          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.366e-76
Identity = 142/206 (68.93%), Postives = 166/206 (80.58%), Query Frame = 2
Query:   80 REDMANDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSRDID-PVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            +EDMA   YE+AIA L KLLSEK +LE  AA+K+ QIT++L   G+     PV+R+K GFI+FK EKYEKNP LYG L+KGQ+PKF+VFACSDSRVCPSH+L+FQPGEAFMVRNIANMVP +D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS PD G T +DFIE+WV IC  AK KV  E  + +F EQC +CEK
Sbjct:   63 KEDMA---YEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEK 265          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.949e-72
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 2
Query:   95 NDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSR-DIDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            N++YE+AI  L K+L EK +LE VAAA+I QITA   A  ++   DPVER+K+GF++FKTEK+  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WV +C  AKSKV  E +    ++QC  CEK
Sbjct:   76 NESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEK 276          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.569e-72
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 2
Query:   95 NDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSR-DIDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            N++YE+AI  L K+L EK +LE VAAA+I QITA   A  ++   DPVER+K+GF++FKTEK+  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WV +C  AKSKV  E +    ++QC  CEK
Sbjct:   76 NESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEK 276          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.569e-72
Identity = 136/209 (65.07%), Postives = 161/209 (77.03%), Query Frame = 2
Query:   80 REDMANDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSRDIDPV----ERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            RE+M    Y++AI  L KLL EK++L+  AA K++QITA L    S D  P     ER+KTGF+ FK EKY+KNP LYG LAKGQSP F+VFACSDSRVCPSH+L+FQPGEAF+VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT ++DFIEEWV I   AK+KVK +  D  F E C +CEK
Sbjct:   67 REEMGK-GYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEK 274          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.580e-72
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 2
Query:   95 NDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSR-DIDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            N++YE+AI  L K+L EK +LE VAAA+I QITA   A  ++   DPVER+K+GF++FKTEK+  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WV +C  AKSKV  E +    ++QC  CEK
Sbjct:   75 NESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEK 275          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.258e-71
Identity = 129/201 (64.18%), Postives = 158/201 (78.61%), Query Frame = 2
Query:   95 NDAYEDAIAGLTKLLSEKSDLEGVAAAKIKQITADLEAAGSR-DIDPVERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            N++YE+AI  L K L EK +LE VAA +I QITA   A  ++   DPVER+K+GF++FKTEK+  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WV +C  AKSKV  E +    ++QC  CEK
Sbjct:   76 NESYEEAIDALKKTLIEKGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEK 276          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.863e-59
Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = 2
Query:  287 NPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            NP LYG LAKGQSPKFLVFACSDSRVCPSHIL+FQPGEAF+VRNIANMVPPYD  K+SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GT ASDFIE+WV +   AKSKVK   ++L F + C  CEK
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEK 136          
The following BLAST results are available for this feature:
BLAST of FC931464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAHC_TOBAC7.247e-7969.90Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAH2_ARATH9.464e-7969.27Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHC_ARATH3.976e-7767.63Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL3.366e-7668.93Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH1_FLALI2.949e-7264.68Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABR6.569e-7264.68Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHC_PEA6.569e-7265.07Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHX_FLAPR8.580e-7264.68Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI4.258e-7164.18Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAH2_FLALI2.863e-5980.88Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionC34105D07EF PostHarvP1 Citrus clementina cDNA clone C34105D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931464 ID=FC931464; Name=FC931464; organism=Citrus clementina; type=EST; length=702bp
GAACTCTTCAATACTGGTCCGAGATCGTGAAAAGAAGCGAGCAAGTTGAA
GTCGGCAGAATCCCGGAGAAATTGAAAAGAGAGAAGACATGGCAAACGAC
GCGTACGAGGATGCCATTGCAGGACTGACCAAGCTCCTCAGCGAGAAAAG
CGACCTCGAAGGAGTCGCCGCTGCGAAAATCAAGCAGATAACGGCCGATT
TAGAAGCGGCCGGTTCGAGGGACATTGACCCGGTGGAGAGGATGAAAACC
GGGTTCATTCAATTTAAGACAGAGAAATACGAGAAGAATCCTGATTTGTA
CGGTGCACTGGCCAAAGGCCAAAGCCCCAAGTTTCTGGTATTTGCATGCT
CAGACTCTCGAGTATGTCCATCCCATATCCTCAATTTTCAACCAGGAGAG
GCGTTTATGGTTCGAAACATTGCCAATATGGTCCCTCCATATGACCAGAA
AAAATACTCTGGAGCAGGTGCAGCCATTGAATATGCGGTGCTACATCTGA
AGGTGGAGAATATTGTAGTCATTGGACACAGTTGCTGTGGTGGTATAAAG
GGGCTCATGTCTATCCCTGATAATGGGACCACTGCGAGTGATTTCATAGA
AGAGTGGGTCNAAATCTGTTCATCTGCCAAGTCCAAGGTGAAAAAAGAAA
TGCATGATTTGAGTTTTGAGGAGCAATGCNAGAACTGTGAAAAGAGGCTG
TG
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