FC931507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.050e-83 Identity = 160/230 (69.57%), Postives = 189/230 (82.17%), Query Frame = 2 Query: 2 RVSGRRLSSL-RWNLQQ---TTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 R++GRR SSL RW ++ ++SAF+S N+ + D +++ +S+S S+ S H RG S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIP Sbjct: 3 RIAGRRASSLSRWPVRSVAPSSSAFISANHFSSD--DDSSSPRSISPSL--------ASVFLHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIP 222
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 9.522e-81 Identity = 156/226 (69.03%), Postives = 176/226 (77.88%), Query Frame = 2 Query: 2 RVSGRRLSSLRWNLQQTTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 R++GR+LSS +++SAF + N S SP P S S RG S+ ++S GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIP Sbjct: 3 RIAGRKLSSSA--ATRSSSAFFTRNPFT--------FTDDSSSPARSPSPASLASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIP 218
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 9.522e-81 Identity = 152/210 (72.38%), Postives = 176/210 (83.81%), Query Frame = 2 Query: 50 TTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 ++SAF+S N+ + D +++ +S+S S+ S H RG S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIP Sbjct: 9 SSSAFISANHFSSD--DDSSSPRSISPSL--------ASVFLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIP 208
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.121e-80 Identity = 155/226 (68.58%), Postives = 176/226 (77.88%), Query Frame = 2 Query: 2 RVSGRRLSSLRWNLQQTTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 R++GR+LSS +++SAF + N S SP P S S RG S+ ++S GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+EDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIP Sbjct: 3 RIAGRKLSSSA--AARSSSAFFTRNPFT--------FTDDSSSPTRSPSPTSLASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIP 218
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 6.824e-79 Identity = 155/226 (68.58%), Postives = 180/226 (79.65%), Query Frame = 2 Query: 2 RVSGRRLSSLRWNLQQTTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 RV+GRRLSS + +++S F + + + S SP P S TS IRG S+ ++S LGL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYAS +RLLILKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT++DI+LANSVD+ +LRDPQ+D+ RVKNPEWLVVVGVCTHLGCIP Sbjct: 3 RVAGRRLSS---SAARSSSTFFTRS---------SFTVTDDSSPARSPSP-SLTSSFLDQIRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIP 215
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 8.912e-79 Identity = 143/175 (81.71%), Postives = 159/175 (90.86%), Query Frame = 2 Query: 155 SFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 S TS+ +I G S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIP Sbjct: 12 SVTSNSFSIISGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIP 186
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.505e-75 Identity = 156/230 (67.83%), Postives = 179/230 (77.83%), Query Frame = 2 Query: 2 RVSGRRLSS-LRWNLQQTTSAF-LSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGR--DLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 RV+GRRLSS L W + L+G + D D+A S++SP F S RG S+ + R D GL +DLPATVAAVKNP K+VYDE+NHERYPPGD SKRAFAYF+L+GGRF+YASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI+LANSVDVASLR P++D+ RVKNPEWLVV+GVCTHLGCIP Sbjct: 3 RVAGRRLSSSLSWRPAAAVARGPLAGAGVPDRDDDSARGRSQPRFSIDSP--FFVAS------RGFSSTETVVPRNQDAGL-ADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIP 223
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30 Identity = 64/121 (52.89%), Postives = 89/121 (73.55%), Query Frame = 2 Query: 317 PPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 PP ++ F+YF++ + A+ + I +F+ +MSAS DVLA+A +EVDL++I G V +KWRGKPVFIR RT +I+ AN V+VA+LRDP+ D+ RVK PEWLV++GVCTHLGC+P Sbjct: 63 PP--STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVP 181
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 66/147 (44.90%), Postives = 101/147 (68.71%), Query Frame = 2 Query: 242 LPATVAAVKNPTSKIVYDEHNHERYPPGDASK-RAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 L A+ + + P V E+N DA K R++AYF++ + ++ + + F+ SM+A+ DVLA+A +EV+L++I G V VKW+GKPVFIR RT +IQ ANSVD+++L+DPQ D+ RVK+P+WL+++G+CTHLGC+P Sbjct: 27 LLASKSTYRTPNFDDVLKENN-------DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVP 166
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.907e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 293 DEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 D ++ GD S R +Y ++ + A+ + + F+ S SAS DVLA++ EVDLS I G + VKW+GKPVFIR RT E+IQ ANSVD+++LRDPQ DS RV+ PEWLV++GVCTHLGC+P Sbjct: 52 DFSEYQTKSTGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVP 179 The following BLAST results are available for this feature:
BLAST of FC931507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931507 ID=FC931507; Name=FC931507; organism=Citrus clementina; type=EST; length=681bpback to top |