FC931528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_BOVIN (Probable RNA-binding protein EIF1AD OS=Bos taurus GN=EIF1AD PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 41/115 (35.65%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIFKSTNSDDAN 691 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F D N Sbjct: 7 RKHVVKEVLGEHMVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNN 115
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_DANRE (Probable RNA-binding protein EIF1AD OS=Danio rerio GN=eif1ad PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIFK 667 RK++ + E +T + Q IM+V+ G+NL E + E+ L P KF+K++WIKRG FV+VD IK+G KV ++ +L+ + ++ L+K WPE F+ Sbjct: 7 RKHVVKEVLEDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRGDFVIVD------PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQ 107
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_RAT (Probable RNA-binding protein EIF1AD OS=Rattus norvegicus GN=Eif1ad PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIFKSTNSDDAN 691 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL VR+LQK WPE F N Sbjct: 7 RKHVVQEVLGEHMVPSDQQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEAFSEVAEKQNN 115
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_MOUSE (Probable RNA-binding protein EIF1AD OS=Mus musculus GN=Eif1ad PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIFKSTNSDDAN 691 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL VR+LQK WPE F N Sbjct: 7 RKHVVQEVLGEHMVPSDHQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEAFSEVAEKQNN 115
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_PONAB (Probable RNA-binding protein EIF1AD OS=Pongo abelii GN=EIF1AD PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIF 664 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 106
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_MACFA (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis GN=EIF1AD PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIF 664 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 106
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_HUMAN (Probable RNA-binding protein EIF1AD OS=Homo sapiens GN=EIF1AD PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIF 664 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 106
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_XENLA (Probable RNA-binding protein EIF1AD OS=Xenopus laevis GN=eif1ad PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 401 QSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIF 664 QSI++V+ G+NL EV A+ E+ LA P KF+K++WIKRG F++VD I +G KV + +L+ + R LQK WPE F Sbjct: 25 QSIVKVLGSPGNNLHEVETAEGERFLASMPTKFRKNIWIKRGDFLIVD------PIVEGEKVKAEIAFILYKDHQRLLQKEGLWPEGF 106
BLAST of FC931528 vs. ExPASy Swiss-Prot
Match: EIF1A_DROME (Probable RNA-binding protein EIF1AD OS=Drosophila melanogaster GN=CG31957 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 332 PMKGGRKNLKRAAGEQSLTLQ-DGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYETVRALQKSTEWPEIF---------KSTNSDDAN 691 P RK+L + E L + Q I +V+S RG+NL EV + DE L P KF+KSMW+KRG F++V+ I++G KV + K+L E ++ K+ WP+ F S N DD++ Sbjct: 6 PSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEV-ETVDETFLVSMPNKFRKSMWVKRGDFLLVE------PIEEGDKVKAEICKILTPEHIKEYTKAAIWPDKFTKKPVQEEATSQNKDDSD 128 The following BLAST results are available for this feature:
BLAST of FC931528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931528 ID=FC931528; Name=FC931528; organism=Citrus clementina; type=EST; length=692bpback to top |