FC931591

Overview
NameFC931591
Unique NameFC931591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15533 contig Ccv1_Contig15533:398..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 8.243e-59
Identity = 117/151 (77.48%), Postives = 121/151 (80.13%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + HD VLVGG++ I KV+QLLQDFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  332 MDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 9.114e-58
Identity = 115/151 (76.16%), Postives = 119/151 (78.81%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + HD VLVGG++ I KV+QLLQDFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQI V
Sbjct:  332 MDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.030e-57
Identity = 115/151 (76.16%), Postives = 119/151 (78.81%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K S HD VLVGG++ I KV+QLLQDFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGG MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  332 MDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 2.030e-57
Identity = 114/151 (75.50%), Postives = 119/151 (78.81%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + HD VLVGG++ I KV+QLLQDFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMT LIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  332 MDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.455e-55
Identity = 111/151 (73.51%), Postives = 118/151 (78.15%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + H+ VLVGG++ I KV+QLLQDFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMT LI RNTTIPTKKEQVFSTYSDNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  332 MDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.482e-55
Identity = 113/151 (74.83%), Postives = 117/151 (77.48%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K S  D VLVGG++ I KV+QLL DFFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLI RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  332 MDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 3.242e-55
Identity = 111/151 (73.51%), Postives = 118/151 (78.15%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M KM+ HD VLVGG++ I KV+QLLQDFFNGKEL KSINPDE           IL+GEG EKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  332 MDKMTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINV 482          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.744e-54
Identity = 106/149 (71.14%), Postives = 116/149 (77.85%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   H+ VLVGG++ I KV QLLQDFFNGKELCKSINPDE           ILSG+G+EKVQD             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+ V
Sbjct:  333 KSQVHEVVLVGGSTRIPKVHQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNV 481          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.362e-53
Identity = 112/151 (74.17%), Postives = 117/151 (77.48%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K S HD VLVGG++ I KV+QL QDFFNGKELCKSINPDE           ILSGEGNE+  D             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct:  330 MDKSSVHDVVLVGGSTRIPKVQQL-QDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 478          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 4.844e-51
Identity = 109/153 (71.24%), Postives = 117/153 (76.47%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQL-LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGE-RTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + HD VLVGG++ I KV+Q+ + +FFNGKELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGE R RTRDNNLLGKFELS IPPAPR VPQITV
Sbjct:  332 MDKSTVHDVVLVGGSTRIPKVQQVAMTNFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERRARTRDNNLLGKFELSVIPPAPRVVPQITV 484          
The following BLAST results are available for this feature:
BLAST of FC931591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC8.243e-5977.48Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL9.114e-5876.16Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP7C_PETHY2.030e-5776.16Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_ARATH2.030e-5775.50Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH1.455e-5573.51Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP73_ARATH2.482e-5574.83Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_CHLRE3.242e-5573.51Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_SOYBN2.744e-5471.14Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_MAIZE1.362e-5374.17Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP71_SOLLC4.844e-5171.24Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionC34106H01EF PostHarvP1 Citrus clementina cDNA clone C34106H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931591 ID=FC931591; Name=FC931591; organism=Citrus clementina; type=EST; length=478bp
ATTTAATTTTAAGATCTGTCCTAGATGCGAAAGATGTCATCCCATGATGA
TGTTCTTGTCGGTGGAGCTAGTATGATTCGGAAAGTCCGGCAACTTTTGC
AAGATTTCTTTAATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAG
GCTGTTGCCTATGGTGCTGCTGTGCGAGCTGCTATCTTGAGTGGTGAGGG
TAATGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCGCACCTCTCTCCC
TTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAAC
ACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAA
CCAACCTGGTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCA
GGGACAATAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCCCCAGCT
CCTAGGGGTGTTCCTCAAATCACTGTGT
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