FC931595

Overview
NameFC931595
Unique NameFC931595
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931595 vs. ExPASy Swiss-Prot
Match: ANT1_YEAST (Peroxisomal adenine nucleotide transporter 1 OS=Saccharomyces cerevisiae GN=ANT1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 59/238 (24.79%), Postives = 99/238 (41.60%), Query Frame = 3
Query:   45 SLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQ-----------KYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLK-----------RSGNKSIGTKANLXXXXXXXXXXXXXXQPLDTASSRMQTSAFGKSKGLWKTLTE------GTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSRAL 674
            +L  A +GA+ S ++   +YPLD  KT  Q++V     +           +Y+ + D +        +  LYQG+    + +F+  FVYF+ Y++ ++ Y+K           R G  +  T   L               P+   ++R QT    +S      + +      G  +  + GL   L LT NP+I Y  F +LK        N AG     +LSA   F+LG +S+ +
Sbjct:    3 TLESALTGAVASAMANIAVYPLDLSKTIIQSQVSPSSSEDSNEGKVLPNRRYKNVVDCMINIFKEKGILGLYQGMTVTTVATFVQNFVYFFWYTFIRKSYMKHKLLGLQSLKNRDGPITPSTIEELVLGVAAASISQLFTSPMAVVATRQQTVHSAESAKFTNVIKDIYRENNGDITAFWKGLRTGLALTINPSITYASFQRLKEVFFHDHSNDAG-----SLSAVQNFILGVLSKMI 235          
BLAST of FC931595 vs. ExPASy Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 57/220 (25.91%), Postives = 98/220 (44.55%), Query Frame = 3
Query:   39 IESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAH--GQQK------YRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLXXXXXXXXXXXXXXQPLDTASSRMQTSAFGKSKGLWKTLTEGT-WSDAFDGLGISLLLTSNPAIQYTVFDQLKR--RMLKGKQNKAGGTSPQALSAFAAFVLGAVS 665
            +E+L  A SG +  + +  + YP  T  T+ Q + +    GQQ       Y+   D     I      +LY GL +  +    S FVY+Y Y+  K + LK    + +GT  NL               P+   ++R+Q ++     G +K + +   +   + GL  +L+L SNP++Q+  +++L+   R   G+  K GG     L A A  + G V+
Sbjct:   18 VEALGHAISGGVAGMAAIALTYPFSTVSTRLQVQQKKQQQGQQSEITTVPYKNSIDAFKRIIKEENWRTLYSGLKSALIGIGASSFVYYYWYTLLKSISLKLKNKQELGTIENLAIAALAGCANVLTTLPIWVVNTRLQINSDKGIVGQFKYIIKNEGFGGLYKGLIPALILVSNPSVQFVSYEKLRALWRRQSGR-TKLGGLEVFILGAIAKLIAGIVT 236          
BLAST of FC931595 vs. ExPASy Swiss-Prot
Match: PM34_HUMAN (Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = 3
Query:   42 ESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLXXXXXXXXXXXXXXQPLDTASSRMQ-------------TSAFGKSKGLWKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSRAL 674
            ESL  A +GA+GS+ + T+ +PLDT + + Q + +    +K +    VL E I    + + Y+G          S FVYFY ++  K L++K  G  S  T  +L               PL   ++R++             T+  G      + + +   S  ++G   SLLL  NPAIQ+  ++ LKR++LK +           LS+   F++GAV++A+
Sbjct:    8 ESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEK----RKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVK--GQHST-TGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMK---------LSSLDVFIIGAVAKAI 215          
BLAST of FC931595 vs. ExPASy Swiss-Prot
Match: PM34_MOUSE (Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12
Identity = 63/225 (28.00%), Postives = 108/225 (48.00%), Query Frame = 3
Query:   42 ESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRKLSDVLWEAISNGQVHSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGNKSIGTKANLXXXXXXXXXXXXXXQPLDTASSRMQ-TSAFGKSKGLWKTLTEGTWSDAF-------------DGLGISLLLTSNPAIQYTVFDQLKRRMLKGKQNKAGGTSPQALSAFAAFVLGAVSRAL 674
            ESL  A +GA+GS+ + T+ +PLDT + + Q + +    +K +    VL E I    + + Y+G          S FVYFY ++  K +++K  G +S  T  +L               PL   ++R++   A  +++ +  T  +G   DAF             +G   SLLL  NPAIQ+  ++ LKR++LK +           LS+   F++GA+++A+
Sbjct:    8 ESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEK----RKSKTTHAVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKAVWVK--GQRS-STGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIIPTNYKGI-IDAFHQIIRDEGILALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMK---------LSSLDVFIIGAIAKAI 215          
The following BLAST results are available for this feature:
BLAST of FC931595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ANT1_YEAST1.774e-1424.79Peroxisomal adenine nucleotide transporter 1 OS=Sa... [more]
PM34_DICDI5.162e-1425.91Mitochondrial substrate carrier family protein Q O... [more]
PM34_HUMAN4.832e-1227.68Peroxisomal membrane protein PMP34 OS=Homo sapiens... [more]
PM34_MOUSE8.241e-1228.00Peroxisomal membrane protein PMP34 OS=Mus musculus... [more]
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Properties
Property NameValue
Genbank descriptionC34106H06EF PostHarvP1 Citrus clementina cDNA clone C34106H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931595 ID=FC931595; Name=FC931595; organism=Citrus clementina; type=EST; length=734bp
GAAATTTTGCTTTGGCCAAAAGAAAAATGGGAGTTGATATTGAATCTTTA
TCAGAGGCAACGTCGGGAGCGATAGGATCGCTGTTGAGCACCACAATCTT
GTACCCGCTTGACACATGTAAGACCAAGTATCAGGCCGAGGTTAGAGCTC
ACGGCCAGCAAAAGTACAGGAAACTCTCAGATGTTTTATGGGAAGCTATA
TCCAATGGTCAAGTTCATTCGCTATACCAGGGCCTAGGAACAAAAAATCT
TCAGTCCTTTATTTCACAGTTTGTATACTTCTATGGGTACAGCTATTTCA
AAAGGCTATATCTGAAAAGAAGTGGTAACAAATCGATTGGAACAAAAGCG
AACTTGATAATTGCTGCTACTGCTGGGGCTTGCACTGCCATCATCACTCA
GCCCCTGGATACAGCCTCCTCAAGGATGCAGACAAGTGCCTTTGGAAAAT
CCAAAGGGCTTTGGAAGACCCTCACAGAGGGCACTTGGAGTGATGCATTT
GATGGCCTAGGCATCTCTCTTTTGCTAACCTCAAACCCTGCAATTCAGTA
TACAGTGTTTGATCAGCTGAAACGTCGAATGCTCAAGGGAAAACAAAATA
AAGCAGGGGGCACATCTCCACAGGCCCTTTCTGCCTTCGCGGCTTTTGTC
TTGGGTGCAGTTTCAAGAGCATTGCACTGTTCTGACATATCTGCATCAGG
TGTAAGGTATGATTCAGCTGCCGACCAATGAAAT
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