FC931632

Overview
NameFC931632
Unique NameFC931632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:301..989. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 8.236e-96
Identity = 181/228 (79.39%), Postives = 198/228 (86.84%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLE 684
            A+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVLEALGVV+DL PEG +RCV+E GIGFMMS  YHPAMK V PVRKKLK+KTVFNILGPMLNPA V +AVVGVY+++LV+KMA ALQRFG+KRALVVHS GLDEMSPLG GL+ DVT EKIE FSFDPLD+GIPRCTLE
Sbjct:  137 ANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDLVVKMAKALQRFGMKRALVVHSCGLDEMSPLGGGLVYDVTPEKIEEFSFDPLDFGIPRCTLE 364          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.391e-49
Identity = 106/229 (46.29%), Postives = 141/229 (61.57%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF-GLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLE 684
            AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVLEALG+ I++ PE    CV E GIGFM +  YHP++K + P+RK +K  +VFNILGP+LNPA   +A++GV NE ++  M+    +F   KR  + H  GLDE++ LG  +  D+ Q K  R   DP   G   C +E
Sbjct:   31 ADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFMFAPIYHPSLKKLAPIRKGMKFPSVFNILGPLLNPANTEYALIGVSNEPILELMSEVCLKFKNTKRTFLFHGSGLDELTTLGKVVGYDIQQGKKTRLEIDPTSLGFNSCKIE 259          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.683e-48
Identity = 101/229 (44.10%), Postives = 143/229 (62.45%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF-GLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLE 684
            +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVLEALG+ I++ PE    C+ E GIGFM +  YHP++K + P+RK +K+ + FNILGP+LNPA   ++++GV NE ++  M+    +F   +R  + H  GLDE++ LG  +  D+ Q K  R   DP  +G   C +E
Sbjct:   31 SDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFMFAPIYHPSLKKLAPIRKGMKIPSTFNILGPLLNPANTEYSLIGVSNEPILELMSEVCLQFQNTQRTFLFHGSGLDELTTLGKVVGYDIQQGKKTRIEIDPTSFGFASCKIE 259          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.871e-48
Identity = 111/231 (48.05%), Postives = 139/231 (60.17%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIER-FSFDPLDYGIPRCTLEA 687
            A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EG  RC+ EAGIGFM + K+HPAM+F  PVR+++ ++TVFNILGP+ NPA   + V+GV +  L  K+A AL R     ALVVH + G+DE++  GP LI DV   +  R     P D G+PR   +A
Sbjct:   33 ATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRFAGPVRREIGIRTVFNILGPLTNPARARYQVLGVASAALAEKLAYALSRLDTVHALVVHGDGGVDELTLSGPNLIFDVRAGQAPRQMLVAPEDVGLPRAPQDA 263          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.871e-48
Identity = 111/231 (48.05%), Postives = 139/231 (60.17%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIER-FSFDPLDYGIPRCTLEA 687
            A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EG  RC+ EAGIGFM + K+HPAM+F  PVR+++ ++TVFNILGP+ NPA   + V+GV +  L  K+A AL R     ALVVH + G+DE++  GP LI DV   +  R     P D G+PR   +A
Sbjct:   33 ATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFHPAMRFAGPVRREIGIRTVFNILGPLTNPARARYQVLGVASAALAEKLAYALSRLDTVHALVVHGDGGVDELTLSGPNLIFDVRAGQAPRQMLVAPEDVGLPRAPQDA 263          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.896e-48
Identity = 107/231 (46.32%), Postives = 141/231 (61.04%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFS-FDPLDYGIPRCTLEA 687
            A  A I+A L  L  KGET  EI G+A+ M   +  V   G  VD  GTGGD +NT NIST A+ +AA  GA VAK             DVLE LGV I+LD EG  RC+ +AGIGFM + K+HPAM++  PVR+++ ++T+FN+LGP+ NPA   + V+GV N  L  K+ANAL + G++RALVVH S+GLDE+S     L+ DV      + S   P D+G+     EA
Sbjct:   33 ATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIGFMFAPKFHPAMRYAGPVRREIGIRTIFNVLGPLTNPARAEYQVIGVANAGLAEKLANALSKMGIRRALVVHGSDGLDEISISASTLVFDVRAGATPQASTISPSDFGLSLAPREA 263          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.395e-48
Identity = 109/231 (47.19%), Postives = 140/231 (60.61%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLEA 687
            A  A I+AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EG  RC+ +AGIGFM + K+HPAM+F  PVR+++ ++TVFNILGP+ NPA   + V+GV +  L  K+ANAL R     ALVVH + G+DE++  GP LI +V     + +    P D G+ R   EA
Sbjct:   33 ATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFMFAPKFHPAMRFAGPVRREIGIRTVFNILGPLTNPARARYQVLGVASAALAEKLANALSRLDTVHALVVHGDGGVDELTLSGPNLIFEVRAGHALRQMIVAPEDVGLERAPREA 263          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.425e-47
Identity = 108/230 (46.96%), Postives = 139/230 (60.43%), Query Frame = 1
Query:    7 EALISAFLVLLRAKGETFGEIVGLARAMIKYA----TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTL 681
            EA ++AFLV L+ KGET  EI   A A+ + A    T+ EGL   VD  GTGGDG  T NIST A+ + A  G  VAK             DVLEALGV IDLD +G  RCVDE GIGF+ +   HPAM+ V   R+++ V+TVFNILGP+ NPA +   V+GV+   L   +A  L   G++RA VVH   GLDE+S  GP  + ++ + KI+ + FDPL YG   C+L
Sbjct:   34 EAQVAAFLVALKMKGETEEEISAFALALREKARRVITQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGPLANPANIVGQVLGVFTPELQETLAKVLNNLGVERAFVVHGHGGLDEVSLTGPTRVFELNRGKIDSYLFDPLSYGFSYCSL 260          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 103/244 (42.21%), Postives = 143/244 (58.61%), Query Frame = 1
Query:    1 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLE 684
            A  A I+AF+  LR KGET  EI G AR M   AT++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE    C++EAGIGF+ +   H AMKF    RK++ ++T+FNILGP+ NPA  P  V+GVY E LV K+A+ L+  G +R  VV+  +G+DE++      + +VT E+++ + F P D G  RCT++
Sbjct:   32 ATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALHGAMKFAIGPRKEIGIRTIFNILGPLTNPAGAPCQVLGVYREELVEKLAHVLKNLGCRRGFVVYGMDGMDEITLTTETRMAEVTPEEVKAWLFKPEDLGFARCTMD 275          
BLAST of FC931632 vs. ExPASy Swiss-Prot
Match: TRPD_RUBXD (Anthranilate phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=trpD PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.430e-47
Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 1
Query:   19 SAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGERRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPR 672
            +A L  LR +GE+  EIVG ARAM ++A +V      VD  GTGGD   T+N+ST A+ +A   G  +AK             DVLEALG  I+L PE   RC++EAGIGFM +  +HPAM+ V PVR +L  +TVFN+LGP+ NPA     +VGV++   V  MA AL+  G +RALVVH  +G+DE++  GP L+ +V    +E +   P D+G+ R
Sbjct:   38 AALLTALRVRGESVQEIVGFARAMRRFAARVRAPEGVVDTCGTGGDAKGTINVSTAAAFVARGAGVVIAKHGNRAATSRAGSADVLEALGAAIELSPEQVSRCIEEAGIGFMFARTHHPAMRHVAPVRAELPFRTVFNLLGPLTNPAGARRQLVGVFSAGYVRPMAEALEGLGAERALVVHGRDGMDEITVTGPTLVAEVGGGGVEEYEISPEDFGLSR 256          
The following BLAST results are available for this feature:
BLAST of FC931632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH8.236e-9679.39Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_CHLCV3.391e-4946.29Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLFF1.683e-4844.10Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLSY2.871e-4848.05Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA2.871e-4848.05Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_HERA24.896e-4846.32Anthranilate phosphoribosyltransferase OS=Herpetos... [more]
TRPD_CHLAD6.395e-4847.19Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CARHZ1.425e-4746.96Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_GEOSF1.861e-4742.21Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RUBXD2.430e-4744.75Anthranilate phosphoribosyltransferase OS=Rubrobac... [more]

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Properties
Property NameValue
Genbank descriptionC34107C10EF PostHarvP1 Citrus clementina cDNA clone C34107C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931632 ID=FC931632; Name=FC931632; organism=Citrus clementina; type=EST; length=689bp
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGAAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGA
GGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTGGGTCCTATGTTG
AATCCTGCATGTGTGCCATTCGCTGTGGTTGGTGTTTACAATGAAAACTT
GGTACTCAAAATGGCCAATGCACTGCAACGATTTGGCCTGAAAAGAGCAT
TGGTTGTTCACTCAGAGGGTTTGGATGAGATGAGTCCCCTTGGACCTGGT
CTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGATCC
ATTGGACTACGGCATTCCTCGCTGCACTTTAGAAGCTTG
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