FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.899e-54
Identity = 102/110 (92.73%), Postives = 106/110 (96.36%), Query Frame = 1
Query:    1 AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            AYE+A NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAAKGLEYLHEKA PHIIHRDIKSSN+L+FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE A+
Sbjct:  139 AYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM 248          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.459e-54
Identity = 101/110 (91.82%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            +YEFA+NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAA+GLEYLHEKA+PHIIHRDIKSSNVL+F+DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE A+
Sbjct:  144 SYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM 253          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.640e-44
Identity = 82/109 (75.23%), Postives = 98/109 (89.91%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            Y+FA+ GSLHD+LHGRKGV+GA+PGPVL+W QRVKIA GAAKGLE+LHEK  P I+HRD++SSNVL+FDD VAK+ADF+L+N + D AARLHSTRVLGTFGYHAPE A+
Sbjct:  146 YQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAM 254          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21
Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+  NGSL D L G+ GVK       L W +R+KIA+G+ KGL YLHE ADP IIHRD+KS+N+L+ +   AK+ADF LS    D      +T+V GT GY  PE
Sbjct:  707 YEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPE 805          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.672e-20
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ SNG L D L+G K      P P LSW+QR++I +G+A+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS  AP M     ST V G+FGY  PE
Sbjct:  598 YEYMSNGPLRDHLYGSKE-NDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAP-MDEGHVSTAVKGSFGYLDPE 701          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YEF   GSL D LH     K A     L W  R+KIA GAAKGLE+LH+KA+P +I+RD KSSN+L+ +    K++DF L+   P       STRV+GT+GY APE A+
Sbjct:  160 YEFMPLGSLEDHLHDLPPDKEA-----LDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAM 263          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPE 321
            Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH    P IIHRDIKSSN+L+ ++  A ++DF ++   P  A++ H ST VLGT GY  PE
Sbjct:  721 YDYMENGSLWDLLHGSLKKVK-------LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIP--ASKTHASTYVLGTIGYIDPE 819          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+   G+L D L+           P LSW+QR++I VGAA+GL YLH  +   IIHRD+KS+N+L+ D+ +AK+ADF LS   PD+     ST V G+FGY  PE
Sbjct:  560 YEYMEKGTLKDHLYD------LDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPE 659          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPE 321
            YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ VAK++DF LS   P  A++ H ST V GTFGY  PE
Sbjct:  599 YEYMPHGTLKDHLFRRDKASD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPE 701          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ +NG L   L+G          P LSW+QR++I +GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK+ADF LS   P +     ST V G+FGY  PE
Sbjct:  583 YEYMANGPLRSHLYGADL-------PPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPE 681          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PTI1_SOLLC2.899e-5492.73Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH6.459e-5491.82Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH4.640e-4475.23Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y5977_ARATH5.519e-2150.94Probable leucine-rich repeat receptor-like protein... [more]
Y5613_ARATH4.672e-2050.00Probable receptor-like protein kinase At5g61350 OS... [more]
PBS1_ARATH1.359e-1949.54Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
ERL1_ARATH1.775e-1950.93LRR receptor-like serine/threonine-protein kinase ... [more]
Y2393_ARATH8.811e-1947.17Probable receptor-like protein kinase At2g39360 OS... [more]
Y5389_ARATH1.151e-1847.66Probable receptor-like protein kinase At5g38990 OS... [more]
THE1_ARATH1.151e-1846.23Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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