FC931656

Overview
NameFC931656
Unique NameFC931656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.273e-101
Identity = 136/154 (88.31%), Postives = 145/154 (94.16%), Query Frame = 2
Query:    2 RGIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLP 463
            +GIHVITPNKKANSGPLDQYLKLR LQRKSYTHYFYEATVGAGLPII TLRGLLETGD ILRIEGI SGTLSYLFN+FVG RSFSEVVTEAK AG+TEPDPRDDLSGTDVARKVIILARESGLKL+L+DLP++SLVPEPLK C S EEFM++LP
Sbjct:  664 KGIHVITPNKKANSGPLDQYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDRSFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEPLKGCTSVEEFMEKLP 817          

HSP 2 Score: 117.087 bits (292), Expect = 1.273e-101
Identity = 54/78 (69.23%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  451 EAITTFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            E +  +D +LAK+R +AE++GEVLRYVGVVDA+N++G VELRRYK++HPFAQL+GS+ IIAFTT RYK+ PLIVRGPG
Sbjct:  814 EKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPG 891          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.150e-74
Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 2
Query:    2 RGIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            RGIHV+TPNKKANSGPLDQYLK+R LQRKSYTHYFYEATVGAGLPII TLRGLLETGD ILRIEGIFSGTLSYLFN+FVGTRSFSEVV EAK+AG+TEPDPRDDLSGTDVARKV ILARESGLKL+L  LPVQ+LVP+PL+ACASAEEFM++LP   +    + +     G+ L
Sbjct:  659 RGIHVVTPNKKANSGPLDQYLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVL 832          

HSP 2 Score: 128.257 bits (321), Expect = 3.864e-29
Identity = 61/78 (78.21%), Postives = 71/78 (91.03%), Query Frame = 1
Query:  451 EAITTFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            E +  FD+EL+KQR+EAE AGEVLRYVGVVDA+ K+G VEL+RYK+DHPFAQLSG++ IIAFTTKRYKEQPLIVRGPG
Sbjct:  809 EKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPG 886          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-72
Identity = 132/174 (75.86%), Postives = 153/174 (87.93%), Query Frame = 2
Query:    2 RGIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            +GIHVITPNKKANSGPLDQYLKLR +QR SYTHYFYEATVGAGLPII TLRGLLETGD ILRIEGIFSGTLSY+FN+F GTR+FS+VV EA+EAGYTEPDPRDDLSGTDVARKV++LARESGL+LELSD+PV+SLVPE L +C+SA+EFM++LP   ++W  +       G+ L
Sbjct:  665 KGIHVITPNKKANSGPLDQYLKLRTMQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVAEAREAGYTEPDPRDDLSGTDVARKVVVLARESGLRLELSDIPVKSLVPETLASCSSADEFMQKLPSFDEDWARQRSDAEAAGEVL 838          

HSP 2 Score: 122.479 bits (306), Expect = 2.120e-27
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 1
Query:  391 PCSKSCARTIKSLCIC*RVYEAITTFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            P       T+ S        + + +FD++ A+QR +AE AGEVLRYVG +DA+N+ G+VELRRY+RDHPFAQLSGS+ IIAFTT RYKEQPLIVRGPG
Sbjct:  795 PVKSLVPETLASCSSADEFMQKLPSFDEDWARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPG 892          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.164e-72
Identity = 134/174 (77.01%), Postives = 152/174 (87.36%), Query Frame = 2
Query:    2 RGIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            +GIHVITPNKKANSGPLD+YLKLR LQR SYTHYFYEATVGAGLPII TLRGLLETGD ILRIEGIFSGTLSY+FN+F G R+FS+VV EAK+AGYTEPDPRDDLSGTDVARKVIILARESGL LELSD+PV+SLVPE LK+C SA+E+M++LP   ++W  + K     G+ L
Sbjct:  668 KGIHVITPNKKANSGPLDRYLKLRTLQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGARTFSDVVAEAKKAGYTEPDPRDDLSGTDVARKVIILARESGLGLELSDIPVRSLVPEALKSCTSADEYMQKLPSFDEDWARERKNAEAAGEVL 841          

HSP 2 Score: 119.398 bits (298), Expect = 1.795e-26
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 1
Query:  391 PCSKSCARTIKSLCIC*RVYEAITTFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            P        +KS        + + +FD++ A++R+ AE AGEVLRYVGVVD ++K+G+VELR YKRDHPFAQLSGS+ IIAFTT RYK+QPLIVRGPG
Sbjct:  798 PVRSLVPEALKSCTSADEYMQKLPSFDEDWARERKNAEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRGPG 895          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.313e-69
Identity = 135/174 (77.59%), Postives = 147/174 (84.48%), Query Frame = 2
Query:    2 RGIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            RGIHVITPNKKANSGPLDQYLKLR LQR+SYTHYFYEATV AGLPII TL+GLLETGD ILRIEGIFSGTLSY+FN+F  T  FSEVV+EAK AGYTEPDPRDDL+GTDVARKVIILAR SGLKLELSD+PVQSLVPEPL+  ASAEEF+ QLP    +   K +     G+ L
Sbjct:  669 RGIHVITPNKKANSGPLDQYLKLRALQRRSYTHYFYEATVVAGLPIITTLQGLLETGDKILRIEGIFSGTLSYIFNNFKSTTPFSEVVSEAKAAGYTEPDPRDDLAGTDVARKVIILARGSGLKLELSDIPVQSLVPEPLRGIASAEEFLLQLPQFDSDMTRKREDAENAGEVL 842          

HSP 2 Score: 110.153 bits (274), Expect = 1.089e-23
Identity = 49/73 (67.12%), Postives = 66/73 (90.41%), Query Frame = 1
Query:  466 FDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            FD ++ ++R++AE+AGEVLRYVGVVDA+N++G VEL+RYK++HPFAQLSGS+ I AFTT+RY +QP I+RGPG
Sbjct:  824 FDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPG 896          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AK2H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 2 OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 1.051e-42
Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 2
Query:    5 GIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVP 412
            G HVI+ NK A +   ++Y ++     K+  H+ Y ATVGAGLPI  T+R L+++GD IL I GIFSGTLS+LF  F G+  F+E+V +A + G TEPDPRDDLSG DV RK++ILARE+G  +E   + V+SLVP
Sbjct:  565 GFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVP 700          

HSP 2 Score: 53.9138 bits (128), Expect = 1.051e-42
Identity = 25/72 (34.72%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  469 DKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            ++++ ++ + A + G VLRYV   DA N + RV +   + DHP A L   + + A  ++ Y++ PL++RGPG
Sbjct:  719 NEQMVQRLEAAREMGLVLRYVARFDA-NGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPG 789          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: DHOM_SCHPO (Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe GN=SPBC776.03 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.512e-41
Identity = 91/176 (51.70%), Postives = 121/176 (68.75%), Query Frame = 2
Query:    8 IHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSF-----VGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLE-LSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGK 517
            I++ TPNKKA S   D Y  +    ++S     +EA+VGAGLPII TL+ L+ TGD I++IEGIFSGTLSY+FN +      GT SFS++V  AK+ GYTEPDPRDDL+G DVARKV IL+R +G+ +E  S  PV+SL+PEPLK+  +AEEF+  LP+    + S  +    +GK
Sbjct:  116 INIATPNKKAFSASNDVYQNIIKASKESGALLMHEASVGAGLPIISTLKELIATGDEIIKIEGIFSGTLSYIFNVWSPNGKKGTASFSDIVKIAKQNGYTEPDPRDDLNGMDVARKVTILSRIAGVHVESASSFPVKSLIPEPLKSAVNAEEFLAGLPNFDSEFASMREEAEKEGK 291          

HSP 2 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  457 ITTFDKELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKRDHPFAQLSGSEYIIAFTTKRYKEQPLIVRGPG 684
            +  FD E A  R+EAE  G+V+R+VG  D  NK   V+L +Y   HPFA L  S+ II+FTTKRY  +PL+V G G
Sbjct:  272 LPNFDSEFASMREEAEKEGKVVRFVGEADVANKTTLVKLEKYDASHPFANLQSSDNIISFTTKRYHTRPLVVIGAG 347          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AK1H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40
Identity = 82/173 (47.40%), Postives = 111/173 (64.16%), Query Frame = 2
Query:    5 GIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            G HV+TPNKKAN+  +D Y +LR    KS   + Y+  VGAGLP+I  L+ LL  GD +++  GI SG+LSY+F       SFSE  T A+E GYTEPDPRDDLSG DVARK++ILARE+G +LEL+D+ ++ ++P    A      FM  L  L   + ++  + R +GK L
Sbjct:  571 GFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVL 743          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AKH_HAEIN (Bifunctional aspartokinase/homoserine dehydrogenase OS=Haemophilus influenzae GN=thrA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.416e-39
Identity = 84/173 (48.55%), Postives = 114/173 (65.90%), Query Frame = 2
Query:    5 GIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            G HV+TPNKKAN+  L  Y +LR   + S   + YE  VGAGLP+I  L+ LL  GD +   EGI SG+LS++F       S SEV   A+E G+TEPDPRDDLSG DVARK++ILARE+G++LELSD+ V+ ++P+      SA+EFM  LP L + + ++    + +GK L
Sbjct:  571 GFHVVTPNKKANTRELVYYNELRQNAQASQHKFLYETNVGAGLPVIENLQNLLAAGDELEYFEGILSGSLSFIFGKLEEGLSLSEVTALAREKGFTEPDPRDDLSGQDVARKLLILAREAGIELELSDVEVEGVLPKGFSDGKSADEFMAMLPQLDEEFKTRVATAKAEGKVL 743          
BLAST of FC931656 vs. ExPASy Swiss-Prot
Match: AK1H_SERMA (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia marcescens GN=thrA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39
Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 2
Query:    5 GIHVITPNKKANSGPLDQYLKLRPLQRKSYTHYFYEATVGAGLPIIGTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRSFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVQSLVPEPLKACASAEEFMKQLPHLTKNWPSKDKRPRMQGKSL 523
            G HV+TPNKKAN+  ++ Y +LR     S+  + Y+  VGAGLP+I  L+ LL  GD ++R  GI SG+LS++F       S S    +A+  GYTEPDPRDDLSG DVARK++ILARE+G KLELSD+ V+ ++P    A    + F+ +LP L K +         QGK L
Sbjct:  571 GFHVVTPNKKANTSSMNYYQQLRAAAAGSHRKFLYDTNVGAGLPVIENLQNLLNAGDELVRFSGILSGSLSFIFGKLDEGLSLSAATLQARANGYTEPDPRDDLSGMDVARKLLILAREAGYKLELSDIEVEPVLPPSFDASGDVDTFLARLPELDKEFARNVANAAEQGKVL 743          
The following BLAST results are available for this feature:
BLAST of FC931656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
AKH2_ARATH1.273e-10188.31Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH1_ARATH5.150e-7479.31Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_MAIZE1.657e-7275.86Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH1_MAIZE2.164e-7277.01Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_DAUCA1.313e-6977.59Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK2H_ECOLI1.051e-4252.94Bifunctional aspartokinase/homoserine dehydrogenas... [more]
DHOM_SCHPO1.512e-4151.70Probable homoserine dehydrogenase OS=Schizosacchar... [more]
AK1H_ECOLI8.299e-4047.40Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_HAEIN1.416e-3948.55Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK1H_SERMA7.026e-3946.24Bifunctional aspartokinase/homoserine dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionC34107E11EF PostHarvP1 Citrus clementina cDNA clone C34107E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931656 ID=FC931656; Name=FC931656; organism=Citrus clementina; type=EST; length=686bp
GAGAGGAATTCATGTAATCACCCCAAACAAAAAAGCAAATTCCGGACCGC
TGGACCAGTATTTAAAGCTGAGGCCTCTTCAACGGAAATCCTATACACAT
TACTTCTATGAAGCAACTGTTGGAGCTGGTCTTCCAATTATCGGCACTTT
AAGGGGTCTGCTGGAAACCGGGGACCATATATTGCGCATTGAAGGCATTT
TCAGTGGGACTTTGAGTTATCTTTTTAACAGCTTTGTAGGCACAAGATCA
TTCAGTGAGGTAGTGACAGAGGCGAAAGAAGCAGGTTATACTGAACCTGA
TCCAAGGGATGATCTATCTGGAACAGATGTTGCCAGAAAGGTGATAATTC
TTGCCCGAGAATCCGGTCTTAAGCTGGAACTTTCTGATCTCCCTGTTCAA
AGTCTTGTGCCAGAACCATTAAAAGCTTGTGCATCTGCTGAAGAGTTTAT
GAAGCAATTACCACATTTGACAAAGAATTGGCCAAGCAAAGACAAGAGGC
CGAGGATGCAGGGGAAGTCCTTAGATATGTGGGAGTGGTGGATGCTATCA
ACAAAGAGGGGCGTGTAGAGTTGCGAAGATACAAGAGAGATCATCCATTC
GCACAGCTCTCTGGTTCTGAATACATCATAGCTTTCACAACAAAACGATA
CAAGGAGCAGCCACTTATCGTCCGTGGACCTGGTGC
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