FC931669

Overview
NameFC931669
Unique NameFC931669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 8.393e-126
Identity = 218/232 (93.97%), Postives = 229/232 (98.71%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQIN+PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF P+GLTTEVKSVEMHHESLLEALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAKGA+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 3.189e-125
Identity = 216/232 (93.10%), Postives = 230/232 (99.14%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQIN+PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGP+GLTTEVKSVEMHHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAKGA++FT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETF+EYPPLGRFAVRDMRQTVAVGV+K+VDK+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 445.662 bits (1145), Expect = 1.212e-124
Identity = 217/232 (93.53%), Postives = 229/232 (98.71%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQIN+PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFGPSGLTTEVKSVEMHHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+V+K+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.212e-124
Identity = 216/232 (93.10%), Postives = 229/232 (98.71%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLL+ALDQIN+PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGM+VTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGA++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVVETF+EYPPLGRFAVR MRQTVAVGVIK+V+K+
Sbjct:  201 MIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKPGMVVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 2.067e-124
Identity = 217/232 (93.53%), Postives = 228/232 (98.28%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQIN  KRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM+VTFGP+GLTTEVKSVEMHHE+L EALPGDNVGFNVKNV+VKDLKRG+VASNSKDDPAKGA++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKE+EKEPKFLKNGDAG VKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+VDK+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQINDAKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 443.736 bits (1140), Expect = 4.605e-124
Identity = 217/232 (93.53%), Postives = 227/232 (97.84%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQI +PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFGP+GLTTEVKSVEMHHE+L EALPGDNVGFNVKNV+VKDLKRG VASNSKDDPAK A+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSV+K+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGIVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 1.750e-123
Identity = 215/232 (92.67%), Postives = 227/232 (97.84%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MI+RSTNLDWYKGPTLLEALDQI++PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPSGLTTEVKSVEMHHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETF  YPPLGRFAVRDMRQTVAVGVIKSV+K+
Sbjct:  201 MIDRSTNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 439.884 bits (1130), Expect = 6.650e-123
Identity = 213/232 (91.81%), Postives = 228/232 (98.28%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLL+ALDQI++PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM+VTF P+GLTTEVKSVEMHHESL EA PGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVII+NHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+V+K+
Sbjct:  201 MIERSTNLDWYKGPTLLDALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTTEVKSVEMHHESLTEAHPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIINHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.481e-122
Identity = 213/232 (91.81%), Postives = 227/232 (97.84%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERS+NLDWYKGPTLLEALDQIN+PKRP++KPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGP+GLTTEVKSVEMHHESLLEALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELE  PKFLKNGDAGFVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSV+K+
Sbjct:  201 MIERSSNLDWYKGPTLLEALDQINEPKRPSEKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
[Close]
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 438.343 bits (1126), Expect = 1.935e-122
Identity = 213/232 (91.81%), Postives = 226/232 (97.41%), Query Frame = 1 
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            MIERSTNLDWYKGPTLLEALDQIN+PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGP+GLTTEVKSVEMHHESLLEALPGDNVGFNVKNV+VKDLKRG+VASNSKDDPAK A+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELE  PKFLKNGDAG VKMIPTKPMVVETF+ YPPLGRFAVRDMRQTVAVGVIK V+K+
Sbjct:  201 MIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEALPKFLKNGDAGIVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKGVEKK 432
The following BLAST results are available for this feature:
BLAST of FC931669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_ARATH8.393e-12693.97Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_SOLLC3.189e-12593.10Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_ORYSJ1.212e-12493.53Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A1_DAUCA1.212e-12493.10Elongation factor 1-alpha OS=Daucus carota PE=3 SV... [more]
EF1A_TOBAC2.067e-12493.53Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_MANES4.605e-12493.53Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A2_DAUCA1.750e-12392.67Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A_SOYBN6.650e-12391.81Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A2_HORVU1.481e-12291.81Elongation factor 1-alpha OS=Hordeum vulgare GN=BL... [more]
EF1A_WHEAT1.935e-12291.81Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34107F12EF PostHarvP1 Citrus clementina cDNA clone C34107F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931669 ID=FC931669; Name=FC931669; organism=Citrus clementina; type=EST; length=728bp
ATGATTGAGAGGTCCACAAACCTTGACTGGTACAAGGGCCCAACCCTTCT
TGAAGCTCTTGACCAGATCAATCAACCCAAGAGACCAACAGACAAGCCTC
TCCGTCTCCCCCTTCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTC
CCTGTTGGCCGTGTTGAAACTGGTGTACTCAAGCCCGGTATGATAGTCAC
ATTCGGTCCATCTGGATTGACTACTGAAGTTAAGTCAGTTGAGATGCACC
ATGAGTCTCTCCTGGAGGCACTTCCTGGTGATAATGTGGGGTTCAACGTT
AAGAATGTTTCAGTGAAGGATCTTAAGCGTGGTTACGTTGCATCTAACTC
CAAGGATGATCCCGCCAAGGGGGCATCCAACTTCACCTCCCAAGTTATCA
TCATGAACCACCCTGGCCAGATTGGAAACGGTTATGCACCTGTTCTTGAT
TGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAAATCTTGACCAAGAT
TGACAGGCGATCTGGTAAGGAGCTGGAGAAGGAGCCCAAATTCTTAAAGA
ATGGTGATGCTGGGTTTGTTAAGATGATTCCCACCAAGCCTATGGTTGTG
GAAACTTTCTCCGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACAT
GCGCCAGACTGTCGCTGTTGGAGTCATCAAGAGCGTGGACAAGAGGATCC
ATCTGGAGCCAAGTAACCAGTCTGCTGC
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