FC931680

Overview
NameFC931680
Unique NameFC931680
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931680 vs. ExPASy Swiss-Prot
Match: CXIP4_ARATH (CAX-interacting protein 4 OS=Arabidopsis thaliana GN=CXIP4 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.111e-48
Identity = 95/126 (75.40%), Postives = 103/126 (81.75%), Query Frame = 2 
Query:  110 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSKNSAQPKPSSNEPDADNPYNSYQGLLALARITNTNADEARGACKKCGRVGHLTFQCRNFLSVKEDKEKDQEAIQAAVLSELD 487
            MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + Q K      D +N Y S+QGLLALARIT +N DEARG+CKKCGRVGHLTFQCRNFLS KEDKEKD  AI+AAVLS L+
Sbjct:    1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKEEPKTTQQKTE----DPENSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEAAVLSGLE 122
The following BLAST results are available for this feature:
BLAST of FC931680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CXIP4_ARATH4.111e-4875.40CAX-interacting protein 4 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionC34107G11EF PostHarvP1 Citrus clementina cDNA clone C34107G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931680 ID=FC931680; Name=FC931680; organism=Citrus clementina; type=EST; length=628bp
GAGAAACAAAAGAGGGGGAGAAAAAAAAAAAGAAAAAAAGAACTGTAGCT
CTTCGATTAGGGATTTCGAATCAATCACTGCACAGATTTGGTAAGTACGA
TACTTCAATATGCCGGCCACCGCTGGACGAGTTCGCATGCCCGCGAACAA
TAGGGTTCACAGTAGTGCAGCCCTGCAAACTCACGGTATATGGCAAAGTG
CCATTGGGTACGACCCTTATGCACCAAACAAAGATGACTCCAAGAATTCA
GCACAGCCGAAACCCTCTAGCAATGAACCAGATGCTGATAATCCGTACAA
TAGCTACCAAGGTCTTTTAGCGCTTGCCCGCATAACTAATACCAATGCCG
ACGAGGCTCGTGGAGCTTGCAAGAAATGCGGTCGTGTTGGGCACTTGACA
TTTCAGTGCAGGAACTTTCTGAGTGTTAAGGAAGATAAGGAAAAAGACCA
GGAAGCAATTCAGGCTGCGGTTTTGTCTGAGTTGGATAAAATTAAGGGGA
AGGTGGGGAAGCTGAACGGAAAAGGTAAGGTTGAGAGTGAGAATGACAGT
GACGAGGATGAAGAAGAGGAGAGCGAAAGTTCAGACTCAGATGCAGATTC
AGAGATGGAGAGGATTATAGCTGCAAGG
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