FC931683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 359.377 bits (921), Expect = 9.947e-99 Identity = 189/221 (85.52%), Postives = 201/221 (90.95%), Query Frame = 2 Query: 2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKET 664 +VE++NCKLLLVDKKITNARDL+ VLEDAIRG YPILIIAEDIEQEALATLVVNKLRG LKIAAL+APGFGERKSQYLDDIAILTG TVIR+EVGL+LDK GKEVLGNASKVVLTK+T+TIVGDGSTQDAV KRV QI+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK T Sbjct: 266 SVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAT 486
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.100e-97 Identity = 187/219 (85.39%), Postives = 200/219 (91.32%), Query Frame = 2 Query: 2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658 +VE++NCKLLLVDKKITNARDL+ VLEDAIRG YPILIIAEDIEQEALATLVVNKLRG LKIAALKAPGFGERKSQYLDDIAILTG TVIR+EVGL+LDK GKEVLG+A+KVVLTK+T+TIVGDGSTQDAV KRV QI+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK Sbjct: 266 SVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK 484
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 353.984 bits (907), Expect = 4.179e-97 Identity = 186/220 (84.55%), Postives = 202/220 (91.82%), Query Frame = 2 Query: 5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKET 664 VE+ENCKLLLVDKKITNARDLIN+LEDAIR +PI+IIAEDIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTGGTVIR+EVGL LDK KEVLGNA+KVVLTKDTTTIVGDGSTQ+AV+KRV+QI+ IE AEQ+YE+EKL+ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK+T Sbjct: 261 VEFENCKLLLVDKKITNARDLINILEDAIRSGFPIVIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLDKADKEVLGNAAKVVLTKDTTTIVGDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDT 480
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.756e-95 Identity = 183/219 (83.56%), Postives = 198/219 (90.41%), Query Frame = 2 Query: 8 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKET 664 EYENCKLLLVDKKITNARDLINVLE+AIRG YPILIIAEDIEQEALATLVVNKLRG+LKI A+KAPGFGERK+QYLDDIAILTGGTVIRDEVGL LDK VLG A+KVVLTK++TTIVGDGSTQ+ V+KRVAQI+ LIE AEQDYE+EKLNERIAKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL++KVDAIK+T Sbjct: 167 EYENCKLLLVDKKITNARDLINVLEEAIRGQYPILIIAEDIEQEALATLVVNKLRGSLKICAIKAPGFGERKTQYLDDIAILTGGTVIRDEVGLTLDKADNTVLGTAAKVVLTKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDT 385
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.554e-80 Identity = 151/217 (69.59%), Postives = 179/217 (82.49%), Query Frame = 2 Query: 8 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658 EYENCK+LLVDKKI+ ARD+I +LE AIRG YP+LI+AE++EQEALATLVVNKLRG LK+ A+KAPGFGER+S YL+DIAILTGGTV+ DE+G++L++ VLG A+K+ +TK+ TT+VGDGST V+ RV QIR L +QDYEREKL ERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNAT+AA CTLLRLS KVD IK Sbjct: 98 EYENCKILLVDKKISTARDIITILESAIRGNYPLLIMAEEVEQEALATLVVNKLRGTLKVVAIKAPGFGERRSSYLEDIAILTGGTVVGDEMGVSLEQATDAVLGTAAKITITKERTTVVGDGSTAADVAARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIK 314
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.039e-63 Identity = 124/218 (56.88%), Postives = 163/218 (74.77%), Query Frame = 2 Query: 5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658 V++EN ++L+ DKKI++ +DL+ VLE R +LIIAEDIE EALATLVVNK RG L +AA+KAPGFG+R+ L DIAILTGG +I +EVGL+L+ V +++G K+ + KD TTIV DG T + V KR+AQIR + ++ DY++EKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+ LS+KV+ +K Sbjct: 211 VDFENARILITDKKISSIQDLVPVLEKVARAGQSLLIIAEDIEGEALATLVVNKARGVLNVAAVKAPGFGDRRKAMLQDIAILTGGQLISEEVGLSLEMVDLDMMGIGRKISINKDNTTIVADGGTAEEVKKRIAQIRKQLGESDSDYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELK 428
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.039e-63 Identity = 122/217 (56.22%), Postives = 161/217 (74.19%), Query Frame = 2 Query: 8 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658 E EN +LL+V+KKI++ +DL+ +LE R P+LIIAED+E EALATLVVNKLRG L + A+KAPGFGER+ L DIA+LTGG VI ++VGL LDKV E+LG A KV ++KD TTIV + + V KRV Q+R ++ + +Y++EKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+ L+ ++++K Sbjct: 212 EIENARLLIVNKKISSLQDLVGILEQVARAGQPLLIIAEDLEGEALATLVVNKLRGVLNVVAIKAPGFGERRQAMLQDIAVLTGGQVISEDVGLTLDKVDLEMLGTARKVTISKDNTTIVSEAANAGDVGKRVEQLRRQLDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHLTKTIESVK 428
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.156e-63 Identity = 125/217 (57.60%), Postives = 160/217 (73.73%), Query Frame = 2 Query: 8 EYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658 EYEN LL+ KI++ +DL+ +LE R P+L+IAED+E EALATLVVN+LRG L A+KAP FG+R+ L+DIAILTGG +I ++VG+ LDKV +++G A K+ +TKD TTIV DGST+ AV KRVAQIR +E + +Y+REKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNAT+AA TLL LS + A K Sbjct: 213 EYENAYLLITSNKISSLQDLVPILERVAREGRPLLVIAEDVEGEALATLVVNRLRGVLNAVAVKAPAFGDRRKAMLEDIAILTGGQLISEDVGIKLDKVTLDMMGVARKITVTKDKTTIVTDGSTKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFK 429
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 123/219 (56.16%), Postives = 160/219 (73.06%), Query Frame = 2 Query: 5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKE 661 VE EN ++L+ DKKI++ ++L+ VLE R P+LIIAED+E +ALATLVVNK RG L +AA+KAPGFGER+ L DIAILT G +I +E+GL+LD E LG A K+ + KD TTIV +T+ + KR+AQIR +E + +Y+ EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ Sbjct: 211 VELENVRILITDKKISSIQELVPVLEKVARLGQPLLIIAEDVEGDALATLVVNKARGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKK 429
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 123/219 (56.16%), Postives = 160/219 (73.06%), Query Frame = 2 Query: 5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKE 661 VE EN ++L+ DKKI++ ++L+ VLE R P+LIIAED+E +ALATLVVNK RG L +AA+KAPGFGER+ L DIAILT G +I +E+GL+LD E LG A K+ + KD TTIV +T+ + KR+AQIR +E + +Y+ EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ Sbjct: 211 VELENVRILITDKKISSIQELVPVLEKVARLGQPLLIIAEDVEGDALATLVVNKARGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKK 429 The following BLAST results are available for this feature:
BLAST of FC931683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931683 ID=FC931683; Name=FC931683; organism=Citrus clementina; type=EST; length=675bpback to top |