FC931698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_BOVIN (Probable RNA-binding protein EIF1AD OS=Bos taurus GN=EIF1AD PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFKSTNSDDANGK 697 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F D N + Sbjct: 7 RKHVVKEVLGEHMVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNNDR 117
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_PONAB (Probable RNA-binding protein EIF1AD OS=Pongo abelii GN=EIF1AD PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFKSTNSDDANGK 697 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F N + Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNNR 117
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_DANRE (Probable RNA-binding protein EIF1AD OS=Danio rerio GN=eif1ad PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFK 667 RK++ + E +T + Q IM+V+ G+NL E + E+ L P KF+K++WIKRG FV+VD IK+G KV ++ +L+ + ++ L+K WPE F+ Sbjct: 7 RKHVVKEVLEDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRGDFVIVD------PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQ 107
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_RAT (Probable RNA-binding protein EIF1AD OS=Rattus norvegicus GN=Eif1ad PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFKSTNSDDAN 691 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL VR+LQK WPE F N Sbjct: 7 RKHVVQEVLGEHMVPSDQQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEAFSEVAEKQNN 115
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_MOUSE (Probable RNA-binding protein EIF1AD OS=Mus musculus GN=Eif1ad PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIFKSTNSDDAN 691 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL VR+LQK WPE F N Sbjct: 7 RKHVVQEVLGEHMVPSDHQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEAFSEVAEKQNN 115
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_MACFA (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis GN=EIF1AD PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIF 664 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 106
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_HUMAN (Probable RNA-binding protein EIF1AD OS=Homo sapiens GN=EIF1AD PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 347 RKNLKRAAGEQSLTLQDGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIF 664 RK++ + + + D Q I++V+ G+NL EV A+ ++ L P+K++K++WIKRG F++VD I++G KV ++ VL + VR+LQK WPE F Sbjct: 7 RKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD------PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 106
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_XENLA (Probable RNA-binding protein EIF1AD OS=Xenopus laevis GN=eif1ad PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 401 QSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIF 664 QSI++V+ G+NL EV A+ E+ LA P KF+K++WIKRG F++VD I +G KV + +L+ + R LQK WPE F Sbjct: 25 QSIVKVLGSPGNNLHEVETAEGERFLASMPTKFRKNIWIKRGDFLIVD------PIVEGEKVKAEIAFILYKDHQRLLQKEGLWPEGF 106
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_DROME (Probable RNA-binding protein EIF1AD OS=Drosophila melanogaster GN=CG31957 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 332 PMKGGRKNLKRAAGEQSLTLQ-DGQSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIF---------KSTNSDDAN 691 P RK+L + E L + Q I +V+S RG+NL EV + DE L P KF+KSMW+KRG F++V+ I++G KV + K+L E ++ K+ WP+ F S N DD++ Sbjct: 6 PSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEV-ETVDETFLVSMPNKFRKSMWVKRGDFLLVE------PIEEGDKVKAEICKILTPEHIKEYTKAAIWPDKFTKKPVQEEATSQNKDDSD 128
BLAST of FC931698 vs. ExPASy Swiss-Prot
Match: EIF1A_XENTR (Probable RNA-binding protein EIF1AD OS=Xenopus tropicalis GN=eif1ad PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 401 QSIMQVVSLRGSNLIEVLDAKDEKSLALFPAKFQKSMWIKRGSFVVVDESGKEKAIKDGSKVACIVTKVLFYEQVRALQKSTEWPEIF 664 Q I++V+ G+NL EV ++ E+ LA P KF+K++WIKRG F++VD I +G KV + +L+ + R LQK WPE F Sbjct: 25 QRIVKVLGSPGNNLHEVETSEGERFLASMPTKFRKNIWIKRGDFLIVD------PIAEGEKVKAEIAFILYKDHQRLLQKEGLWPEGF 106 The following BLAST results are available for this feature:
BLAST of FC931698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931698 ID=FC931698; Name=FC931698; organism=Citrus clementina; type=EST; length=702bpback to top |