FC931716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.133e-60 Identity = 125/216 (57.87%), Postives = 146/216 (67.59%), Query Frame = 3 Query: 96 MADEHKHEE------PA-----GESVKEKITEKIH-------GHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 MA+EHKH+E PA ES+ +KI+EKIH +K+KV+RLFGRE+PVHKVLGGGKPAD+F+W+NKK+S GVLGGATA WV +CH +IV LAVLFLWSNA+ FINKSPP+IPEV+IPEEP+LQLAS LR EINR F LREIASGRDLKKFL IAGLWV+SI+G NFLTL Sbjct: 1 MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTL 216
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60 Identity = 119/200 (59.50%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 96 MADEHKHEEPAGESVKEKITEKIHGHXXXXXXXXXXXXXXXXXXXXX-LKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLF 692 M ++HKHEE S+ EKI EKIHGH K+K++RLFGREKPVHKVLGGGKPAD+FLWRNKK+S GVLG TA WV +CH I ALA LFLWSNA TFI+KS P IPEV+IPE+P+LQL S LR EINR LLR IASG+D+KKF+ VIAGLWV+SI+GS NFLTLF Sbjct: 1 MVEDHKHEE----SILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLF 196
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60 Identity = 122/198 (61.62%), Postives = 141/198 (71.21%), Query Frame = 3 Query: 96 MADEHKHEEPAGESVKEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 MA+EHKHEE S+ EKI+EKIHGH LKTK++RLFGRE+P+HK+ GGGKPAD+FLWRNKK+S GVLG AT W+ H I+ALAVLFLWS+ASTFI+KSP IPEV+IPE+ VLQLAS LR EINR F +LR+IASGRDLKKFL VIAGLWV+S VGS CNFLTL Sbjct: 1 MAEEHKHEE----SIMEKISEKIHGHDDSSSSSSDSDDDKNSAS---LKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTL 191
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.253e-59 Identity = 121/212 (57.08%), Postives = 144/212 (67.92%), Query Frame = 3 Query: 96 MADEHKHEEPAG-----------ESVKEKITEKIH---GHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 MADEHKHEE + ES+ EK++EKIH LK+KV+RLFGRE+PVHKVLGGGKPAD+F+W++KK+S GV GGAT WV +CH +IVALAVLFLWSNA+ FI+KSPP+IPEV+IPEEP+LQLAS LR EINR LREIASGRD+KKFLS IAGLWV+SI+G +FLTL Sbjct: 1 MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTL 212
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.098e-55 Identity = 109/198 (55.05%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 96 MADEHKHEEPAGESVKEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 MA+E + P ES+ EKI+EKIH H +K K++R+FGREKPVHKVLGGGKPADVFLWR+KK+S VLG ATAIWV +CH I+AL LFLWSNA T INK+ P+IPE+++PEE L +AS+LR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSA---VKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTL 195
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.070e-54 Identity = 111/198 (56.06%), Postives = 133/198 (67.17%), Query Frame = 3 Query: 96 MADEHKHEEPAGESVKEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 MA+E + ES+ EKI +KIH H LK K++RLFGREKPVHKVLGGG PADVFLWR+KK+SA VLG ATAIWV VCH LI ALA LFL SNA F+NK+PP+IPE++I EE L + SALR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSA---LKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTL 195
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38 Identity = 73/151 (48.34%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 237 LKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 + ++R+FGRE+P+H VLGGGKPADV LWR+KK++ G+L T IW+ +C I+ L + FLWSNA +NKSP + ++YIPE+P+LQ ASA+ FE+N AF LR IA RD+K F+ + GLW+VS++G+W +FL+L Sbjct: 47 INAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSL 194
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.262e-35 Identity = 71/145 (48.97%), Postives = 98/145 (67.59%), Query Frame = 3 Query: 255 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 RLF R+KP+H VLGGGK ADV LWRNKKISA VL GATAIWV VC+ L++ + F+WSNAS F+N+S R+P + +P++ ++ A+ E+NR L+++A +LK+FL + GLWV ++VGS CNFLT+ Sbjct: 44 RLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTV 188
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 246 KVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 K +LF R++ +H + GGGK AD+ LWR KI+A ++ G + +W +CH + ++ F+WS AS F+N P IPEV + E QLA + N+ L ++A GRD F L++VSI+G++ NF+ L Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNL 166
BLAST of FC931716 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 255 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVXXXXXXXXXXXXVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTL 689 +LF R++ +H++LGGG ADV LWR K +S G++ A W+ + L++ L++LFLWS +++ +N+ P +PE I E + + LR +N+ + +IA RD + + V L+++S++GS +F TL Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTL 151 The following BLAST results are available for this feature:
BLAST of FC931716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931716 ID=FC931716; Name=FC931716; organism=Citrus clementina; type=EST; length=694bpback to top |