FC931749

Overview
NameFC931749
Unique NameFC931749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 4.524e-76
Identity = 139/159 (87.42%), Postives = 149/159 (93.71%), Query Frame = 2
Query:  230 KMDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +MDG+   S SGV+  LPNYKLG+TLGIGSFG+VKIAEHALTGHK AIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETP+DIY+VMEYV SGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSK  +++
Sbjct:   23 RMDGSGTGSRSGVESILPNYKLGRTLGIGSFGRVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKI 181          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.242e-74
Identity = 139/159 (87.42%), Postives = 148/159 (93.08%), Query Frame = 2
Query:  233 MDGASNR-SSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            MD +SNR  ++GV+  LPNYKLGKTLGIGSFGKVKIAEH +TGHK AIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIR YEVIET SDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDS+  +++
Sbjct:    1 MDHSSNRFGNNGVESILPNYKLGKTLGIGSFGKVKIAEHVVTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRQYEVIETTSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSRCNIKI 159          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 108/161 (67.08%), Postives = 126/161 (78.26%), Query Frame = 2
Query:  233 MDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFM---HPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            MDG    S +     L NY LGK LG+G+F KV IAEH  T HK AIK+LNRR+++  EMEEK +REIKILRLF+   HPHIIR+YEVI TP DI+VVMEY ++G+L DYI+EK RLQEDEAR  FQQIIS VEYCHRN VVHRDLKPENLLLDSK+ ++L
Sbjct:    1 MDGGGEHSEA-----LKNYYLGKILGVGTFAKVIIAEHKHTRHKVAIKVLNRRQMRAPEMEEKAKREIKILRLFIDLIHPHIIRVYEVIVTPKDIFVVMEYCQNGDLLDYILEKRRLQEDEARRTFQQIISAVEYCHRNKVVHRDLKPENLLLDSKYNVKL 156          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53
Identity = 100/146 (68.49%), Postives = 123/146 (84.25%), Query Frame = 2
Query:  257 SSGVD---MFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLD 685
            S G++     + NY+L KTLGIGSFGKVK+AEH  TG K AIKILNR KIKN++M+EK+RREI+ ++LF HPHII+LYEVIET +DI++VMEYV  GELF+YIV+ G+L EDE+R  FQQ+ISGV+YCH +MVVHRDLKPENLLLD
Sbjct:   18 SGGIEKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLD 163          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 96/161 (59.63%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  224 YRKMDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +RKM  A  +   G  + + +Y LG TLG+G+FGKVK+ +H LTGHK A+KILNR+KI+++++  K+RREI+ L+LF HPHII+LY+VI TPSDI++VMEYV  GELFDYI + GRL E E+R  FQQI+SGV+YCHR+MVVHRDLKPEN+LLD+    ++
Sbjct:    7 WRKMATAEKQKHDG-RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 166          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 96/161 (59.63%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  224 YRKMDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +RKM  A  +   G  + + +Y LG TLG+G+FGKVK+ +H LTGHK A+KILNR+KI+++++  K+RREI+ L+LF HPHII+LY+VI TPSDI++VMEYV  GELFDYI + GRL E E+R  FQQI+SGV+YCHR+MVVHRDLKPEN+LLD+    ++
Sbjct:    2 WRKMATAEKQKHDG-RVRIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 161          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 96/161 (59.63%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  224 YRKMDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +RKM  A  +   G  + + +Y LG TLG+G+FGKVK+ +H LTGHK A+KILNR+KI+++++  K+RREI+ L+LF HPHII+LY+VI TPSDI++VMEYV  GELFDYI + GRL E E+R  FQQI+SGV+YCHR+MVVHRDLKPEN+LLD+    ++
Sbjct:    7 WRKMATAEKQKHDG-RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 166          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 96/161 (59.63%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  224 YRKMDGASNRSSSGVDMFLPNYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +RKM  A  +   G  + + +Y LG TLG+G+FGKVK+ +H LTGHK A+KILNR+KI+++++  K+RREI+ L+LF HPHII+LY+VI TPSDI++VMEYV  GELFDYI + GRL E E+R  FQQI+SGV+YCHR+MVVHRDLKPEN+LLD+    ++
Sbjct:    7 WRKMATAEKQKHDG-RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 166          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50
Identity = 89/141 (63.12%), Postives = 119/141 (84.40%), Query Frame = 2
Query:  284 NYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +Y LG TLG+G+FGKVKI EH LTGHK A+KILNR+KI+++++  K++REI+ L+LF HPHII+LY+VI TP+D ++VMEYV  GELFDYI + GR++E EAR  FQQI+S V+YCHR+MVVHRDLKPEN+LLD++   ++
Sbjct:   15 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKI 155          
BLAST of FC931749 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50
Identity = 89/141 (63.12%), Postives = 119/141 (84.40%), Query Frame = 2
Query:  284 NYKLGKTLGIGSFGKVKIAEHALTGHKAAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWTLRL 706
            +Y LG TLG+G+FGKVKI EH LTGHK A+KILNR+KI+++++  K++REI+ L+LF HPHII+LY+VI TP+D ++VMEYV  GELFDYI + GR++E EAR  FQQI+S V+YCHR+MVVHRDLKPEN+LLD++   ++
Sbjct:   15 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKI 155          
The following BLAST results are available for this feature:
BLAST of FC931749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KIN10_ARATH4.524e-7687.42SNF1-related protein kinase catalytic subunit alph... [more]
KIN11_ARATH3.242e-7487.42SNF1-related protein kinase catalytic subunit alph... [more]
RKIN1_SECCE1.084e-5367.08Carbon catabolite-derepressing protein kinase OS=S... [more]
AMPKA_DICDI5.381e-5368.495'-AMP-activated serine/threonine-protein kinase c... [more]
AAPK1_RAT7.770e-5259.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB7.770e-5259.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_MOUSE7.770e-5259.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN7.770e-5259.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_RAT5.569e-5063.125'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG5.569e-5063.125'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionC34108E09EF PostHarvP1 Citrus clementina cDNA clone C34108E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931749 ID=FC931749; Name=FC931749; organism=Citrus clementina; type=EST; length=717bp
AACAGAAGAATAAAATTGGAAAAAAAGACAAAAAAAAAAAAAAAAATACT
AGACTATTTGGTGTTACAGTAATTGTATTAAATACATAATTTATTTGAAC
ATTTTATCACAAAAAGTTATTAACTGTGATTGAAATTTTCAATTTGGGTC
TCGTTTTCAATTCAGTTTTAGTAGCTCGATTTCGCCTCAGTGTCGTTGGC
TCAGATTCTGCTTCTTCTTTCTCTATAGGAAAATGGATGGAGCCTCTAAC
CGAAGCAGTAGTGGTGTGGATATGTTTTTACCAAATTACAAGCTTGGTAA
AACTCTTGGAATTGGATCCTTTGGTAAGGTGAAAATTGCAGAGCATGCAT
TGACTGGCCACAAAGCTGCTATCAAGATACTTAACCGTCGCAAGATTAAA
AACATGGAAATGGAAGAGAAAGTGAGACGAGAGATTAAAATCTTGAGATT
GTTTATGCATCCCCACATCATACGACTTTATGAAGTTATAGAAACACCAA
GTGATATTTACGTTGTGATGGAGTATGTGAAATCTGGAGAGTTATTTGAT
TATATTGTGGAGAAAGGGAGGCTGCAGGAGGATGAAGCCCGAAACTTTTT
CCAGCAGATAATTTCTGGTGTGGAGTACTGCCACAGGAATATGGTGGTTC
ATAGAGACCTTAAGCCTGAGAATTTGCTTTTGGACTCTAAATGGACGTTA
AGATTGCTGATTTTGGC
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