FC931756

Overview
NameFC931756
Unique NameFC931756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.652e-82
Identity = 153/231 (66.23%), Postives = 180/231 (77.92%), Query Frame = 1
Query:    4 ILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSGVIPEAGERDQERAVASFGHVHGHAHGLSPD-----PKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            ILI SMIGV  PLF+R +  L PD N+F ++K FA+GIIL TGFMHVLPDSF+ML+S CL++NPWHKFPFSGF+AMLS + TL +DS+ATS+Y+ K   G++P               H HGH HG + D      +D  SN QLLRYRVIAMVLELGI+VHS+VIGLS+GAT++TCTIKGLIAALCFHQMFEGMGLGGCILQAEY  MK+ VM FFF+VTTPFGIALGIA
Sbjct:   51 ILIASMIGVGAPLFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAVGIMP---------------HGHGHGHGPANDVTLPIKEDDSSNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNMKKFVMAFFFAVTTPFGIALGIA 266          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.255e-80
Identity = 152/234 (64.96%), Postives = 184/234 (78.63%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSGV---IPEAGERDQERA-VASFGHVHGHA--HGL-SPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            +ILITS+IGVCLP F R IPA  P+++ F++VK+FA+GIIL+TGFMHVLPDSF+ML+S CL DNPWHKFPF+GFVAM+SA+ TLMVDS+ TS+++K     +   +      DQE   V   GHVH H   H L   + K+  S  QLLRYR++A+VLELGIVV SIVIGLSVG TNNTCTIKGL+AALCFHQMFEGMGLGGCILQAEY  +K+ VM FFF+VTTPFG+ LG+A
Sbjct:   58 SILITSLIGVCLPFFARSIPAFQPEKSHFLIVKSFASGIILSTGFMHVLPDSFEMLSSPCLNDNPWHKFPFAGFVAMMSAVFTLMVDSITTSVFTKSGRKDLRADVASVETPDQEIGHVQVHGHVHSHTLPHNLHGENDKELGSYLQLLRYRILAIVLELGIVVQSIVIGLSVGDTNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYGWVKKAVMAFFFAVTTPFGVVLGMA 291          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.174e-78
Identity = 144/226 (63.72%), Postives = 178/226 (78.76%), Query Frame = 1
Query:    4 ILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSGVIPEAGERDQERAVASFGHVHGHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            IL+TSMIGV  PLF+R++  LHPD  +F+++K FA+GIIL TGFMHVLPDSF+ML+S CL+DNPWHKFPF+GFVAMLS + TL +DS+ATS+Y+KK     + +  E      +    H+      L+   + +  ++QLLRYRVIA VLELGI+VHS+VIGLS+GATN+TCTIKGLIAALCFHQMFEGMGLGGCILQAEY  +K+ VM FFF+VTTP GIALGIA
Sbjct:   58 ILVTSMIGVAAPLFSRYVTFLHPDGKIFMIIKCFASGIILGTGFMHVLPDSFEMLSSPCLEDNPWHKFPFTGFVAMLSGLVTLAIDSIATSLYTKKA----VADDSEERTTPMIIQIDHLP-----LTTKERSSTCSKQLLRYRVIATVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFVMAFFFAVTTPSGIALGIA 274          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.449e-76
Identity = 141/227 (62.11%), Postives = 178/227 (78.41%), Query Frame = 1
Query:    4 ILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSGVIP-EAGERDQERAVASFGHVHGHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            IL TS+IGV  PLF+R+I  L PD N F++VK F++GIIL TGFMHVLPDSF+ML+S CL DNPWHKFPF+GFVAM+S + TL +DS+ TS+Y+ K + G +P E    DQE+A+   GH H H HG+    KD   + QLLRY+VIAMVLE+GI+ HS+VIGLS+GATN++CTIKGLI ALCFH +FEG+GLGGCILQA++  +K+ +M FFF+ TTP GI LGIA
Sbjct:   54 ILTTSLIGVTSPLFSRYISFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDSFEMLSSKCLSDNPWHKFPFAGFVAMMSGLVTLAIDSITTSLYTGKNSVGPVPDEEYGIDQEKAIHMVGHNHSHGHGVVLATKD---DGQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIGLGGCILQADFTNVKKFLMAFFFTGTTPCGIFLGIA 277          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.489e-65
Identity = 127/231 (54.98%), Postives = 167/231 (72.29%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSG---VIP-EAGERDQERAVASFGHVHGHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            +IL+ SMIGV LPLF+R IPAL PDR + V+VK  A+G+ILATGFMHVLPDSFD LTS CL ++PW KFPF+ F+ M+SA+  LM++S A   Y+++ +     V+P E G    +         +G ++    +  + D   +LLR +VIA +LELGIVVHS+VIGL++GA++N CT++ LIAALCFHQ+FEGMGLGG ILQA++K      MVFFFSVTTPFGI LG+A
Sbjct:   62 SILVASMIGVSLPLFSRSIPALGPDREMSVIVKTLASGVILATGFMHVLPDSFDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFAMCAYARRTSKREGEVVPLENGSNSVDTQNDIQTLENGSSYVEKQEKVNEDKTSELLRNKVIAQILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMVFFFSVTTPFGIVLGMA 292          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.671e-57
Identity = 117/236 (49.58%), Postives = 154/236 (65.25%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNSGVIPEAGERDQERAVASFG---------HVHGHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            ++L   +IGV  PL  ++ P+L P+   F V KAFAAG+ILATGFMHVLP+ ++ LTS CLK   W +FPF+GF+AM++AI TL VDS ATS Y  K +       G+ +++ A    G         H HGH HG+    +  +S  QL R RV+A VLE+GI+VHS+VIG+S+GA+ +  T K L AAL FHQ FEG+GLGGCI Q  +  M   +M  FFSVTTP GIA+G+A
Sbjct:   55 SVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPCLKGEAW-EFPFTGFIAMVAAILTLSVDSFATS-YFHKAHFKTSKRIGDGEEQDAGGGGGGGDELGLHVHAHGHTHGIV-GVESGESQVQLHRTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEGLGLGGCIAQGNFNCMSITIMSIFFSVTTPVGIAVGMA 287          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.932e-55
Identity = 110/228 (48.25%), Postives = 154/228 (67.54%), Query Frame = 1
Query:    4 ILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKK--CNSGVIPEAGERDQERAVASFGHVHGHA-HGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGI 678
            +L+   +GV LPL  + IPAL P+ ++F +VKAFAAG+IL TGF+H+LPD+F+ L+S CL+D    KFPF+GFVAMLSA+ TLM+D+ AT  Y ++   N+    +      E   A   H+H HA HG          + +L+R R+++ VLE+GIVVHS++IG+S+GA+ +  TIK L+AAL FHQ FEG+GLGGCI  A+ K    ++M  FFSVT P GI +G+
Sbjct:   58 LLVAGGVGVSLPLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNVVVDEEEHAGHVHIHTHASHG------HTHGSTELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGL 279          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.224e-51
Identity = 107/233 (45.92%), Postives = 156/233 (66.95%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCL-KDNPWHKFPFSGFVAMLSAIATLMVDSLATSIY--SKKCNSG-VIPEAGERDQERAVASFGHVH---GHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGI 678
            +ILI  + GVCLP+F      L  + N F+ VKAFAAG+ILATGF+H+LPD+ + LTSSCL ++ PW  FP +G VAM ++I T++++S A+     S+    G  +P +   ++E A     H H   GH+HG    P+D D     +R +++  +LELGIVVHS++IG+S+GA+ +  TIK LIAA+ FHQ+FEG GLGGCI +A++++ K  VM+ FF++T P GI +GI
Sbjct:   56 SILIAGVFGVCLPIF-----GLKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCLGEEPPWGDFPMTGLVAMAASILTMLIESFASGYLNRSRLAKEGKTLPVSTGGEEEHAHTGSAHTHASQGHSHGSLLIPQDDDHID--MRKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITFHQLFEGFGLGGCISEAKFRVKKIWVMLMFFALTAPIGIGIGI 281          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.014e-50
Identity = 107/228 (46.93%), Postives = 142/228 (62.28%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATS-IYSKKCNSGVIPEAGERDQERAVASFGHVHGHAHGLSPDPKDADSNQ-QLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGI 678
            T+LI  +IGV  PL  +  P+L P+   F V KAFAAG+ILATGFMHVLP++++ML S CL    W +FPF+GF+AM++AI TL VD+ ATS  Y   C +      GE  +                        DS + Q+LR RVIA VLELGI+VHS+VIG+S+GA+ +    K L  AL FHQ FEG+GLGGCI Q ++K +   +M  FF++TTP GI +G+
Sbjct:   60 TVLIAGIIGVLFPLLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCLTSEAW-EFPFTGFIAMIAAILTLSVDTFATSSFYKSHCKASKRVSDGETGES---------------------SVDSEKVQILRTRVIAQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLSVTIMSTFFAITTPIGIVVGM 265          
BLAST of FC931756 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.332e-49
Identity = 110/271 (40.59%), Postives = 147/271 (54.24%), Query Frame = 1
Query:    1 TILITSMIGVCLPLFTRWIPALHPDRNLFVVVKAFAAGIILATGFMHVLPDSFDMLTSSCLKDNPWHKFPFSGFVAMLSAIATLMVDSLATSIYSKKCNS--------------GVIPEAGERDQERAV------------------------------ASFGHVHGHAHGLSPDPKDADSNQQLLRYRVIAMVLELGIVVHSIVIGLSVGATNNTCTIKGLIAALCFHQMFEGMGLGGCILQAEYKLMKRLVMVFFFSVTTPFGIALGIA 681
            +IL+    GV +PL  R    L  + NLFV  KAFAAG+ILATGF+H+L    + L++ CL D PW KFPF GF AM++A+ATL+VD + T  Y +K                  V+P  GER  +  V                                 GH HGH+HG      D ++     R+ V++ +LELGIV HSI+IGLS+G + + CTI+ LIAAL FHQ FEG  LGGCI QA+++     +M  FF++TTP GI +G A
Sbjct:   34 SILLAGAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCLPDFPWSKFPFPGFFAMVAALATLLVDFMGTQYYERKQERNQAATEAAAGSEEIAVVPVVGERVTDNKVFGEEDGGGIHIVGIRAHAAHHRHSHSNSHGTCDGHAHGHSHGHMHGNSDVENG---ARHVVVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPLGIGIGTA 301          
The following BLAST results are available for this feature:
BLAST of FC931756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
IRT1_ARATH6.652e-8266.23Fe(2+) transport protein 1 OS=Arabidopsis thaliana... [more]
ZIP10_ARATH1.255e-8064.96Probable zinc transporter 10 OS=Arabidopsis thalia... [more]
ZIP8_ARATH1.174e-7863.72Probable zinc transporter 8 OS=Arabidopsis thalian... [more]
IRT2_ARATH2.449e-7662.11Fe(2+) transport protein 2 OS=Arabidopsis thaliana... [more]
ZIP7_ARATH1.489e-6554.98Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7... [more]
ZIP5_ARATH5.671e-5749.58Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5... [more]
ZIP1_ARATH6.932e-5548.25Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1... [more]
ZIP12_ARATH1.224e-5145.92Probable zinc transporter 12 OS=Arabidopsis thalia... [more]
ZIP3_ARATH3.014e-5046.93Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3... [more]
ZIP4_ARATH3.332e-4940.59Zinc transporter 4, chloroplastic OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34108F04EF PostHarvP1 Citrus clementina cDNA clone C34108F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931756 ID=FC931756; Name=FC931756; organism=Citrus clementina; type=EST; length=683bp
ACTATCTTAATCACTAGCATGATTGGTGTCTGTTTACCGCTGTTCACACG
TTGGATCCCGGCTCTGCACCCTGATAGAAACCTTTTCGTTGTCGTTAAGG
CTTTCGCAGCTGGAATTATTCTAGCCACTGGATTCATGCACGTGTTGCCT
GATTCATTTGACATGCTTACCTCTAGTTGCTTGAAAGATAATCCTTGGCA
CAAGTTCCCGTTTTCGGGATTTGTTGCCATGTTGTCTGCCATCGCAACCC
TAATGGTGGACTCATTGGCCACCAGTATTTATAGCAAGAAATGCAATTCT
GGGGTTATTCCTGAAGCCGGCGAGCGAGACCAAGAGAGAGCCGTGGCGAG
CTTTGGACACGTCCATGGCCATGCCCATGGCCTAAGTCCTGATCCAAAAG
ATGCAGATTCTAACCAGCAACTGCTTCGTTATCGTGTTATCGCCATGGTA
TTGGAACTTGGAATTGTTGTTCATTCAATTGTGATAGGACTCTCAGTTGG
AGCCACAAACAATACTTGCACCATTAAAGGTCTCATTGCTGCCCTTTGCT
TCCATCAAATGTTTGAAGGAATGGGCCTAGGTGGTTGCATTCTTCAGGCG
GAGTACAAGTTGATGAAGAGGCTTGTAATGGTGTTCTTCTTCTCTGTAAC
AACTCCATTTGGAATTGCACTTGGGATTGCCTT
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