FC931835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931835 vs. ExPASy Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 336 TFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 593 +F IWPP QRTRDAVI RLIE+L+TPS+LSKRYG +P DEA TAR IE GIE+LQVYSKEISKRM++ VK Sbjct: 25 SFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVK 110
BLAST of FC931835 vs. ExPASy Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 213 PQQESKK-LDAINDIPQQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 593 P+ ES + A+ D QE+ D D+ ++ + ++ RIWPP Q+TRDAV+ RLIETL+T S+LSKRYG + +D+A A+ IE GI++L++YSKEISKRMLE+VK Sbjct: 17 PESESSTTISAMTDPTSQEAASKDT--DLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVK 142
BLAST of FC931835 vs. ExPASy Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 294 IPQQESKKL-NFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 593 +P E++K N ++ RIWPP Q+TRDAVI RLIETL+T S+LSKR+G++ ++EA A+ IE+ GIE+L+ YSKEISKRMLE+VK Sbjct: 26 LPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVK 126
BLAST of FC931835 vs. ExPASy Swiss-Prot
Match: WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 3 Query: 255 PQQESKKLDA------RNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 593 PQ ES+ + R+D + +K+ + F +WPP Q++RD V+ +I+TL+T S+LS +YG + +EA A+ IE GI+ L+VY E S+RM+E+ + Sbjct: 17 PQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEE--KAYDIASRFVSSDGIKNLEVYGIETSERMIESAE 133 The following BLAST results are available for this feature:
BLAST of FC931835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931835 ID=FC931835; Name=FC931835; organism=Citrus clementina; type=EST; length=693bpback to top |