FC931850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL28_NEUCR (60S ribosomal protein L28 OS=Neurospora crassa GN=rpl-28 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.661e-21 Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 2 Query: 5 INVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 +N++KLW+LVPAE R+ Y+SG T+ APVIDLL GY+K+LGKGRLPQ+P+VVRARYVS +AE KIK Sbjct: 73 LNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQVPIVVRARYVSAEAERKIK 139
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_ERYGR (60S ribosomal protein L27a OS=Erysiphe graminis subsp. hordei PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.661e-21 Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 5 INVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKI 202 +N++KLWSL+PAE+R+ YLS DV PVIDLLPLGYSKVLGKGR+P++P+VVRAR+ S++AE KI Sbjct: 73 LNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPKVPLVVRARWFSKEAERKI 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL28A_SCHPO (60S ribosomal protein L28-A OS=Schizosaccharomyces pombe GN=rpl28a PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 4.248e-19 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+D+LW+L+P E RD YL G+ T+VAPVI++L GY KVLGKGRLP+ PV+V+ RYVSR AEEKIK Sbjct: 72 TVNLDRLWTLLPNEARDKYL-GKNTEVAPVINVLQSGYGKVLGKGRLPETPVIVQTRYVSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL28B_SCHPO (60S ribosomal protein L28-B OS=Schizosaccharomyces pombe GN=rpl28b PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.236e-18 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+D+LW+LVP E R+ YL G+ T+VAPVI++L GY KVLGKGRLP PV+++ RYVSR AEEKIK Sbjct: 72 TVNLDRLWTLVPNETREKYL-GKNTEVAPVINVLQSGYGKVLGKGRLPDTPVIIQTRYVSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL28_YEAST (60S ribosomal protein L28 OS=Saccharomyces cerevisiae GN=RPL28 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 8.012e-18 Identity = 38/67 (56.72%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 5 INVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 +N+DKLW+L+P ++RD YL + APVID L GY K+LGKGR+P +PV+V+AR+VS+ AEEKI+ Sbjct: 73 LNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIR 139
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 1.414e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+DKLW+LV +EQ V + KT AP+ID++ GY KVLGKG+LP+ PV+V+A++ SR AEEKIK Sbjct: 72 TVNLDKLWTLV-SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 1.414e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+DKLW+LV +EQ V + KT AP+ID++ GY KVLGKG+LP+ PV+V+A++ SR AEEKIK Sbjct: 72 TVNLDKLWTLV-SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.414e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+DKLW+LV +EQ V + KT AP+ID++ GY KVLGKG+LP+ PV+V+A++ SR AEEKIK Sbjct: 72 TVNLDKLWTLV-SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_HUMAN (60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.414e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+DKLW+LV +EQ V + KT AP+ID++ GY KVLGKG+LP+ PV+V+A++ SR AEEKIK Sbjct: 72 TVNLDKLWTLV-SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
BLAST of FC931850 vs. ExPASy Swiss-Prot
Match: RL27A_BOVIN (60S ribosomal protein L27a OS=Bos taurus GN=RPL27A PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 1.414e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 2 TINVDKLWSLVPAEQRDVYLSGQKTDVAPVIDLLPLGYSKVLGKGRLPQIPVVVRARYVSRDAEEKIK 205 T+N+DKLW+LV +EQ V + KT AP+ID++ GY KVLGKG+LP+ PV+V+A++ SR AEEKIK Sbjct: 72 TVNLDKLWTLV-SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138 The following BLAST results are available for this feature:
BLAST of FC931850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931850 ID=FC931850; Name=FC931850; organism=Citrus clementina; type=EST; length=454bpback to top |