FC931894

Overview
NameFC931894
Unique NameFC931894
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length538
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931894 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.206e-14
Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 1 
Query:   58 MSSSSTRSLATNVFDTGNYSTSLLRVESATVASR-NXXXXXXXXXXXXXXIGMPSDDAGGEFPVLILLHGYVLLNSFYSQLILHVASHGFIVIAPQI 345
            MSSSS+R    N F+ G Y ++LL ++S++   +                +  P ++  G++PV++LLHGY+L NSFYSQL+LHV+SHGFI+IAPQ+
Sbjct:    1 MSSSSSR----NAFEDGKYKSNLLTLDSSSRCCKITPSSRASPSPPKQLLVATPVEE--GDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQL 91
The following BLAST results are available for this feature:
BLAST of FC931894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLH2_ARATH6.206e-1443.30Chlorophyllase-2, chloroplastic OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC34202C12EF PostHarveN Citrus clementina cDNA clone C34202C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931894 ID=FC931894; Name=FC931894; organism=Citrus clementina; type=EST; length=538bp
GGCTATTACATGCAAGCTAAGTAGAAGAAACTTAAGTGAGAAGGAATATA
CGTCATCATGTCTTCATCTTCAACAAGGAGTTTAGCTACAAATGTTTTTG
ATACTGGGAATTATTCAACCAGTCTTCTAAGGGTGGAATCTGCTACTGTG
GCATCACGCAACAGTACAAGCTCCACTCCACTTCCGCCACCCAAGCCACT
TTTGATCGGCATGCCTTCTGATGATGCTGGAGGAGAATTCCCAGTACTGA
TTTTACTCCACGGTTACGTTCTCCTCAACTCTTTCTACTCTCAGCTTATC
TTACATGTTGCTTCTCATGGCTTCATTGTAATCGCTCCTCAGATAAGGTG
ATTGCCAGCACAGACACATTTCGTTGCTTGTAGAGAGTGAATGAAGTAGC
TGGAAGGCTCCATTTTCTTGTCAAAATACTGTTCTGTATTTTTTTGTTTC
TTTTTTCTTGGAGGTCCACACTGTCCTTGTCAATTTTTACATAATAAAAG
AAGCAACTAAAGCGAAAAAAAAAAAAAAAAAAAAAAAA
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