FC931927

Overview
NameFC931927
Unique NameFC931927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG_TOBAC (Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 9.744e-110
Identity = 180/226 (79.65%), Postives = 213/226 (94.25%), Query Frame = 1
Query:    7 KAIKFHCERLPIGFASVGINSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            KAI+FHCE++P+GFASVG+N  E NG+R+E G V+E+EG+P NG+E++ PKKVLILMSDTGGGHRASAEAI++AF+E+FG++YQVF+TDLW++HTPWPFNQLPRSYNFLVKHG LW+MTYY TAPR++HQ+NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILR+KGLLKKI+FTTVITDLSTCHPTWFHKLVTRCYCP+ +VAKRA++AGL   Q+K
Sbjct:   96 KAIRFHCEKIPLGFASVGVNCGESNGVREE-GSVVENEGIPDNGVESEPPKKVLILMSDTGGGHRASAEAIRSAFNEEFGDKYQVFITDLWTEHTPWPFNQLPRSYNFLVKHGSLWRMTYYATAPRLVHQTNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIIFTTVITDLSTCHPTWFHKLVTRCYCPSEEVAKRALRAGLKPYQLK 320          

HSP 2 Score: 23.0978 bits (48), Expect = 9.744e-110
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLPVRPS
Sbjct:  321 VYGLPVRPS 329          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG_SPIOL (Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea GN=MGD A PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 6.273e-109
Identity = 180/226 (79.65%), Postives = 206/226 (91.15%), Query Frame = 1
Query:    7 KAIKFHCERLPIGFASVGINSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            + I+ HC+R+P+GF+S+G+NS E NG+ D   GVLED  +P+N +E + PK+VLILMSDTGGGHRASAEAIKAAF+E+FG++YQVFVTDLWS+HTPWPFNQLPRSYNFLVKHGPLWKM YYGT+PRVIHQSNFAATS FIAREVA+GLMKYQPDIIISVHPLMQHVPLRILR +GLL+KIVFTTV+TDLSTCHPTWFHKLVTRCYCP+ +VAKRA KAGL  SQIK
Sbjct:   81 RVIRLHCDRIPLGFSSIGLNSGESNGVSDNGHGVLEDVRVPVNAVEPESPKRVLILMSDTGGGHRASAEAIKAAFNEEFGDDYQVFVTDLWSEHTPWPFNQLPRSYNFLVKHGPLWKMMYYGTSPRVIHQSNFAATSVFIAREVARGLMKYQPDIIISVHPLMQHVPLRILRGRGLLEKIVFTTVVTDLSTCHPTWFHKLVTRCYCPSNEVAKRATKAGLQPSQIK 306          

HSP 2 Score: 23.0978 bits (48), Expect = 6.273e-109
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLPVRPS
Sbjct:  307 VYGLPVRPS 315          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG_SOYBN (Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Glycine max GN=MGD A PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.404e-108
Identity = 185/236 (78.39%), Postives = 210/236 (88.98%), Query Frame = 1
Query:    7 KAIKFHCERLPIGFASV----------GINSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            +A++FHCE++PIGFAS+          G  + E NG+R +  G +E+EG   NG+E ++PKKVLILMSDTGGGHRASAEAIKAAF+++FG++YQVFVTDLW+DHTPWPFNQLPRSY+FLVKHGPLWKMTYYGTAPRV+HQSNFAAT TFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILR+KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPT DVA+RA+KAGL  SQIK
Sbjct:   79 RAVRFHCEKIPIGFASLRVGDGGDGADGNGNGEGNGVRVDECGGVENEGFRGNGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFGDDYQVFVTDLWADHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQSNFAATGTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAQRALKAGLQQSQIK 314          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG1_ARATH (Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=MGD1 PE=1 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 2.599e-107
Identity = 185/228 (81.14%), Postives = 210/228 (92.11%), Query Frame = 1
Query:   13 IKFHCERL-PIGFASVGIN--SSERNGIRDEN-GGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            I+FHC+++ P  FASVG    SS+ NGIR+   GGVL +EGLPLNG+E D+PKKVLILMSDTGGGHRASAEAI+AAF+++FG+EYQVF+TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYYGT+PR++HQSNFAATSTFIARE+A+GLMKYQPDIIISVHPLMQHVPLR+LR+KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP+ +VAKRA KAGL  SQIK
Sbjct:   90 IRFHCDKVVPESFASVGGVGLSSDENGIRENGTGGVLGEEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDEYQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAREIAQGLMKYQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPSTEVAKRAQKAGLETSQIK 317          

HSP 2 Score: 23.0978 bits (48), Expect = 2.599e-107
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLPVRPS
Sbjct:  318 VYGLPVRPS 326          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG_CUCSA (Monogalactosyldiacylglycerol synthase, chloroplastic OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.440e-106
Identity = 181/224 (80.80%), Postives = 202/224 (90.18%), Query Frame = 1
Query:   13 IKFHCERLPIGFASVGINSSERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            IKFHC + P+GFAS+G  S E NGIRD+  GV +D  LPLN IE + PK+VLILMSDTGGGHRASAEAIKAAF+E+FGN YQVF+TDLW+DHTPWPFNQLPRSYNFLVKHG LWKMTYY TAP+VIHQSNFAATSTFIAREVAKGLMKY+PDIIISVHPLMQHVP+RILR+KGLL KIVFTTV+TDLSTCHPTWFHKLVTRCYCP+ +VAKRA+ AGL  S++K
Sbjct:   88 IKFHCHKPPLGFASLGGVSDETNGIRDDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKGLMKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCPSTEVAKRALTAGLQPSKLK 311          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG1_ORYSJ (Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD1 PE=3 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.009e-94
Identity = 169/237 (71.31%), Postives = 196/237 (82.70%), Query Frame = 1
Query:   13 IKFHCERL-PIGFASVGINSSERNGIRDENGG------------VLEDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            ++ H  ++ P+GFAS+G+      G   E  G            ++E+EG+       + PKKVLILMSDTGGGHRASAEAIKAAF ++FG++YQVFVTDLW+DHTPWPFNQLPRSY+FLVKHGPLWKMTYYGTAPRV+HQ +FAATSTFIAREVAKGLMKYQPD+IISVHPLMQHVPLRILR+KGLL KI FTTV+TDLSTCHPTWFHKLVTRCYCP+A+V+KRA+KAGL  SQIK
Sbjct:   87 VRLHGNQIAPLGFASLGLGVGGGGGGSGEGAGGGGGGGGGEVDGLVEEEGVA----RAEAPKKVLILMSDTGGGHRASAEAIKAAFIQEFGDDYQVFVTDLWTDHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQPHFAATSTFIAREVAKGLMKYQPDVIISVHPLMQHVPLRILRSKGLLDKIPFTTVVTDLSTCHPTWFHKLVTRCYCPSAEVSKRALKAGLQPSQIK 319          

HSP 2 Score: 23.0978 bits (48), Expect = 1.009e-94
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLPVRPS
Sbjct:  320 VYGLPVRPS 328          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG2_ARATH (Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.643e-60
Identity = 106/191 (55.50%), Postives = 144/191 (75.39%), Query Frame = 1
Query:  112 EDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            ++  L L  I  ++ K VLILMSDTGGGHRASAEAI+ AF  +FG++Y+V V D+W ++T WP N + RSY F+VKH  LWK+ ++ T+P+ IH    AA + + A+EV  GLM+Y+P+IIISVHPLMQH+PL +L+ + L K+++F TVITDL+TCHPTWFH  V RCYCP+ +VAKRA+  GL  SQ++
Sbjct:   54 DESSLELIQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHIPLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKRALFDGLDESQVR 244          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG2_ORYSJ (Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 3.142e-60
Identity = 110/189 (58.20%), Postives = 140/189 (74.07%), Query Frame = 1
Query:  121 GLPLN-GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            G+PL  G +    K VLILMSDTGGGHRASAEA++ AF  +FG+ YQVFV DL  ++  WP N + RSY F+++H  LWK+ ++GT+PR +H    AA + F A EV  G+M+Y PDIIISVHPLMQH+PL +L+ + L  K+ F TVITDL+TCHPTWFH  VTRCYCP+A+VAKRA+  GL  SQI+
Sbjct:   57 GVPLPCGRKTAAAKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGWPLNDMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIIISVHPLMQHIPLWVLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALLRGLEPSQIR 245          

HSP 2 Score: 22.7126 bits (47), Expect = 3.142e-60
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLP+RPS
Sbjct:  246 VYGLPIRPS 254          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG2_ORYSI (Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. indica GN=MGD2 PE=3 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 3.142e-60
Identity = 110/189 (58.20%), Postives = 140/189 (74.07%), Query Frame = 1
Query:  121 GLPLN-GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            G+PL  G +    K VLILMSDTGGGHRASAEA++ AF  +FG+ YQVFV DL  ++  WP N + RSY F+++H  LWK+ ++GT+PR +H    AA + F A EV  G+M+Y PDIIISVHPLMQH+PL +L+ + L  K+ F TVITDL+TCHPTWFH  VTRCYCP+A+VAKRA+  GL  SQI+
Sbjct:   57 GVPLPCGRKTAAAKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGWPLNDMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIIISVHPLMQHIPLWVLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALLRGLEPSQIR 245          

HSP 2 Score: 22.7126 bits (47), Expect = 3.142e-60
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  684 VYGLPVRPS 710
            VYGLP+RPS
Sbjct:  246 VYGLPIRPS 254          
BLAST of FC931927 vs. ExPASy Swiss-Prot
Match: MGDG3_ARATH (Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.508e-60
Identity = 102/191 (53.40%), Postives = 147/191 (76.96%), Query Frame = 1
Query:  112 EDEGLPLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLXASQIK 684
            ++E + +  +  ++ K VLILMSDTGGGHRASAEAI+ AF  +FG++Y++ + D+W ++T WP N + R Y F+VKH  LW + ++GT+P+ IH+S  +A + + A+E+  GLM+Y+PDIIISVHPLMQH+PL +++ +GL KK++F TVITDL+TCH TWFH  V+RCYCP+ +VAKRA+  GL  SQI+
Sbjct:   58 KEEVMEMEQMGAERIKTVLILMSDTGGGHRASAEAIRDAFKIEFGDDYRIIIKDVWKEYTGWPLNDMERQYKFMVKHVGLWSVAFHGTSPKWIHKSYLSALAAYYAKEIEAGLMEYKPDIIISVHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHRTWFHHGVSRCYCPSKEVAKRALVDGLDDSQIR 248          
The following BLAST results are available for this feature:
BLAST of FC931927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MGDG_TOBAC9.744e-11079.65Probable monogalactosyldiacylglycerol synthase, ch... [more]
MGDG_SPIOL6.273e-10979.65Monogalactosyldiacylglycerol synthase, chloroplast... [more]
MGDG_SOYBN3.404e-10878.39Probable monogalactosyldiacylglycerol synthase, ch... [more]
MGDG1_ARATH2.599e-10781.14Monogalactosyldiacylglycerol synthase 1, chloropla... [more]
MGDG_CUCSA2.440e-10680.80Monogalactosyldiacylglycerol synthase, chloroplast... [more]
MGDG1_ORYSJ1.009e-9471.31Probable monogalactosyldiacylglycerol synthase 1, ... [more]
MGDG2_ARATH2.643e-6055.50Monogalactosyldiacylglycerol synthase 2, chloropla... [more]
MGDG2_ORYSJ3.142e-6058.20Probable monogalactosyldiacylglycerol synthase 2, ... [more]
MGDG2_ORYSI3.142e-6058.20Probable monogalactosyldiacylglycerol synthase 2, ... [more]
MGDG3_ARATH4.508e-6053.40Monogalactosyldiacylglycerol synthase 3, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionC34202F10EF PostHarveN Citrus clementina cDNA clone C34202F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931927 ID=FC931927; Name=FC931927; organism=Citrus clementina; type=EST; length=711bp
GTTTATAAGGCTATTAAGTTCCACTGTGAGAGATTACCAATTGGGTTCGC
TTCTGTTGGGATTAATTCGAGTGAGAGAAATGGGATAAGGGATGAAAACG
GTGGCGTTTTGGAGGATGAGGGGTTGCCTTTGAATGGTATTGAGAATGAT
CAGCCGAAAAAAGTTTTGATTTTGATGAGTGATACCGGTGGCGGTCACCG
TGCTTCTGCTGAAGCTATTAAGGCCGCGTTTCATGAGAAATTTGGCAATG
AGTATCAGGTGTTTGTTACTGATTTATGGTCGGATCATACGCCTTGGCCG
TTTAACCAATTGCCCCGAAGCTACAACTTCTTGGTAAAGCACGGGCCATT
GTGGAAAATGACATATTATGGAACTGCTCCCCGTGTGATTCACCAATCTA
ATTTTGCCGCTACTTCAACATTCATTGCCCGGGAGGTTGCCAAAGGATTG
ATGAAATACCAGCCGGACATTATTATTAGTGTACATCCACTGATGCAACA
TGTTCCACTTCGTATCCTGAGGGCAAAAGGCCTTCTAAAGAAGATAGTTT
TTACCACAGTAATTACAGATTTAAGCACTTGCCACCCTACATGGTTTCAT
AAACTTGTAACAAGATGCTACTGCCCCACAGCAGATGTAGCAAAGAGGGC
AATGAAAGCTGGTTTGCANGCTTCCCAGATTAAGTTTACGGCCTTCCTGT
TCGACCTTCTT
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