FC931965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931965 vs. ExPASy Swiss-Prot
Match: SNP33_ARATH (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.280e-40 Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 2 Query: 257 MFGLKKSPLRVGRHNSVDPGHQVSSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSS-YSLTSAARNKYRNDFRDSGGLENQSVQELEGYAVYKAEDTTKQVHGCLKIAEEIREDATXALGSLH 685 MFGL+KSP + +HNSVD SS+ NPFDSDDE DNK TL PSKRT+SEP+L TNPF + +++ + SS SL S ++ +Y+N+FRDSGG+ENQSVQELEGYAVYKAE+TTK V GCLK+AE+IR DAT L LH Sbjct: 1 MFGLRKSPANLPKHNSVD---LKSSKPNPFDSDDESDNKHTLNPSKRTTSEPSLADM---TNPFGGERVQKGDSSSSKQSLFSNSKYQYKNNFRDSGGIENQSVQELEGYAVYKAEETTKSVQGCLKVAEDIRSDATRTLVMLH 138
BLAST of FC931965 vs. ExPASy Swiss-Prot
Match: SNP30_ARATH (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana GN=SNAP30 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 52/120 (43.33%), Postives = 66/120 (55.00%), Query Frame = 2 Query: 326 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEGYAVYKAEDTTKQVHGCLKIAEEIREDATXALGSLH 685 S +N ++ + T+ +RTSSEP L T FDDDD KY+N F DSGGL++Q+ +ELE YAVYKAE+TTK V+ CLKIAE+IR D L LH Sbjct: 7 SPGNNKLPNESSNNKGGTITAGRRTSSEPILITPD-----FDDDD------------------KYKNGFNDSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLH 103
BLAST of FC931965 vs. ExPASy Swiss-Prot
Match: SNP29_ARATH (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana GN=SNAP29 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 47/120 (39.17%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 326 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEGYAVYKAEDTTKQVHGCLKIAEEIREDATXALGSLH 685 +S NPFD + E S NPFDDDD + ++ + + SGG ENQ+VQELE YAVY +E+TTK V GCLK+AEEIR DA+ L L+ Sbjct: 5 NSSWNPFDDEKE-------------------AAKSFSLNPFDDDDDDKEV-----------EKRFTSSLKPSGGKENQTVQELESYAVYNSEETTKTVQGCLKVAEEIRCDASKTLVMLN 94 The following BLAST results are available for this feature:
BLAST of FC931965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931965 ID=FC931965; Name=FC931965; organism=Citrus clementina; type=EST; length=685bpback to top |