FC931978

Overview
NameFC931978
Unique NameFC931978
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_BOVIN (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.207e-30
Identity = 77/192 (40.10%), Postives = 109/192 (56.77%), Query Frame = 2
Query:  104 QGKQPLFSFGVISDVQYADIPGGRSFIGVPR-YYRHSLLVLQNAAQRWNNHQKL-KFVINFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLL---------------KISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            +  + LFSFGVI+D+QYAD+  G +F G  R YYRHSLL LQ A + WN  +   + V+  GDI+DG+  + ++ E ++++V+N F+    P +H  GNH  YN  R  L                    + S D  AY+ F P P++RF++LD YD+S +G   + P   + LK L E NPNTE NSP GL
Sbjct:   12 ESSERLFSFGVIADIQYADLEDGYNFQGNRRRYYRHSLLHLQGAIEHWNQERSPPRCVLQLGDIIDGYNAQYKASEKSLERVMNTFQMLRVPVHHTWGNHEFYNFSRDYLTNSKLNTKFLEDQIAHHPETVPSEDYYAYH-FVPFPKFRFILLDAYDMSVLGVDQSSPKYQQCLKILREHNPNTELNSPQGL 202          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_HUMAN (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Homo sapiens GN=C17orf48 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.727e-29
Identity = 78/198 (39.39%), Postives = 110/198 (55.56%), Query Frame = 2
Query:   86 NGLASIQGKQPLFSFGVISDVQYADIPGGRSFIGVPR-YYRHSLLVLQNAAQRWNNHQKLKF-VINFGDIVDGFCPK-DQSLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLL---------------KISSVDGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            N  A     + LFSFGVI+DVQ+AD+  G +F G  R YYRHSLL LQ A + WNN   +   V+  GDI+DG+  + + S ++++ V++ F++   P +H  GNH  YN  R  L                    + S D  AY+ F P P++RF++LD YD+S +G   + P   + +K L E NPNTE NSP GL
Sbjct:    6 NPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWNNESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREYLTHSKLNTKFLEDQIVHHPETMPSEDYYAYH-FVPFPKFRFILLDAYDLSVLGVDQSSPKYEQCMKILREHNPNTELNSPQGL 202          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_RAT (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Rattus norvegicus PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28
Identity = 74/190 (38.95%), Postives = 105/190 (55.26%), Query Frame = 2
Query:  107 GKQPLFSFGVISDVQYADIPGGRSFI-GVPRYYRHSLLVLQNAAQRWNNHQKLKF-VINFGDIVDGFCPKDQ-SLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHML-------------LPLLKISSVDGRAY-YDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            G +PLFSFGVI+D+QYAD+  G +F     RYYRHSL+ LQ A + WN    +   V+  GDI+DG+  + + S ++++ V+N F+    P +H  GNH  YN  R  L             +P    ++     Y Y F P P++RF++LD YD+S +G     P   + +K L E NPN E NSP GL
Sbjct:   13 GPEPLFSFGVIADIQYADLEDGYNFQRSRRRYYRHSLVHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHHTWGNHEFYNFSRDYLANSKLNSKFLEDQIPQHPETTPSENYYAYHFVPFPKFRFILLDSYDLSVLGIDQFSPKYEQCMKILREHNPNVELNSPQGL 202          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_MOUSE (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.496e-27
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 2
Query:  113 QPLFSFGVISDVQYADIPGGRSFI-GVPRYYRHSLLVLQNAAQRWNNHQKLKF-VINFGDIVDGFCPKDQ-SLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSV---------------DGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            +PLFSFGVI+D+QYAD+  G ++     RYYRHSL+ LQ A + WN    +   V+  GDI+DG+  + + S ++++ V+N F+    P +H  GNH  YN  R  L    K++S                +    Y F P P++RF++LD YD+S +G   + P   + +K L E NPN E NSP GL
Sbjct:   15 EPLFSFGVIADIQYADLEDGYNYQRSRRRYYRHSLIHLQGAIEDWNKESSMPCCVLQLGDIIDGYNAQYKVSEKSLELVMNTFQMLKVPVHHTWGNHEFYNFSRDYLASS-KLNSKFLEDQIAQHPETTPSENYYAYHFVPFPKFRFILLDSYDLSVLGIDPSSPKYEQCMKMLREHNPNVELNSPQGL 202          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_XENTR (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25
Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = 2
Query:  110 KQPLFSFGVISDVQYADIPGGRSFIGVP-RYYRHSLLVLQNAAQRWNNHQ-KLKFVINFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGRAY-------------------YDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            ++P F+FG+I+D+QYAD+    +++    RYYR+SL  L+ A + W     K  F++  GDI+DG   KD+S + A+++V+ E +K     +H+ GNH  YN  R  L      S   G                      Y FSP P++RF+++DGYD+S IG     P    AL  L EKNPN + NSP GL
Sbjct:    7 EEPYFTFGIIADIQYADMDNRFNYLKTSMRYYRNSLTQLKAAVEEWAMESIKPAFILQLGDIIDGINTKDKSSKTALERVLVEMDKLPIQFHHVWGNHEFYNFSREYLNGSKLNSQARGDRIDRGGGTSENGEFNDESFYAYHFSPCPKFRFLLIDGYDLSPIGREKTSPKYDIALNLLKEKNPNEDLNSPTGL 200          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_XENLA (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23
Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 2
Query:  110 KQPLFSFGVISDVQYADIPGGRSFIGVP-RYYRHSLLVLQNAAQRWNNHQ-KLKFVINFGDIVDGFCPKDQSLE-AVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSVDGRAY-----------------------YDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEKNSPAGL 625
            ++P F+FG+I+D+QYAD     +++    RYYR+SL  L+ A + W     K KF++  GDI+DG   KD S   A+++V+ E +K     +H+ GNH  YN  R  L      S ++ RA                        Y FSP P++RF+++DGYD+S IG          +   L EKNPN + NSP GL
Sbjct:   21 EEPYFTFGIIADIQYADKDNRLNYLKTSMRYYRNSLTQLKVAIKEWATESIKPKFILQLGDIIDGVNTKDNSSTIALERVLEEMDKLPIQFHHVWGNHEFYNFSREYL----NGSKLNSRARENRIDQQVGTSESGETNDESFYAYHFSPFPKFRFLLIDGYDLSPIGREKTSLKYDISFNLLKEKNPNEDLNSPTGL 214          
BLAST of FC931978 vs. ExPASy Swiss-Prot
Match: ADPRM_DANRE (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Danio rerio GN=zgc:64213 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 67/193 (34.72%), Postives = 104/193 (53.89%), Query Frame = 2
Query:  110 KQPLFSFGVISDVQYADIPGGRSFIGV-PRYYRHSLLVLQNAAQRWNNHQKLKFVINFGDIVDGF-CPKDQSLEAVKKVVNEFEKFNGPAYHMIGNHCLYNLPRHMLLPLLKISSV-------------DGRAYYDFSPTPEYRFVVLDGYDISAIGWPHNHPNTLEALKFLGEKNPNTEK-NSPAGLVGLER 640
            + P+F+FG+I+DVQYADI  G +++    RYYR S  +L++A  +W   ++++ V+  GDI+DG    +D S  A+  V+ E +  +   +H+ GNH  YN  R  LL   +++S              D    Y+FSP P +RFV+LD YD+S IG          + + L + N N +  N P   VGLE+
Sbjct:    2 EDPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW-RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLS-SRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQ 192          
The following BLAST results are available for this feature:
BLAST of FC931978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ADPRM_BOVIN4.207e-3040.10Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_HUMAN2.727e-2939.39Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_RAT1.768e-2838.95Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_MOUSE1.496e-2738.10Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_XENTR1.072e-2536.60Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_XENLA1.004e-2335.35Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
ADPRM_DANRE1.602e-2134.72Manganese-dependent ADP-ribose/CDP-alcohol diphosp... [more]
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Properties
Property NameValue
Genbank descriptionC34203C05EF PostHarveN Citrus clementina cDNA clone C34203C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931978 ID=FC931978; Name=FC931978; organism=Citrus clementina; type=EST; length=658bp
GAAACGCAGAAGACGGAAGCTGTTAAGCTAATAATAATCGATAGGGTGCT
AGCCAGATATATATTAAATCATTATGGGTTCTGCAAATGGGTTGGCAAGT
ATTCAAGGGAAGCAACCTCTTTTTTCTTTTGGGGTTATTTCTGATGTCCA
GTATGCTGATATTCCTGGTGGTCGCTCATTCATTGGTGTTCCCAGGTATT
ATCGTCATAGCCTTCTCGTATTGCAAAATGCAGCTCAAAGATGGAACAAT
CACCAGAAGCTGAAATTTGTGATTAATTTTGGGGATATTGTCGATGGATT
TTGTCCCAAGGACCAATCTCTGGAAGCTGTCAAGAAAGTTGTTAATGAGT
TTGAGAAGTTTAATGGCCCTGCCTATCACATGATTGGTAACCACTGCCTT
TACAATCTTCCCCGCCACATGTTACTTCCTTTACTGAAGATTTCAAGTGT
CGATGGACGTGCCTACTATGATTTTTCACCAACTCCAGAATATAGATTTG
TTGTCCTTGATGGTTATGATATTAGTGCAATTGGTTGGCCTCATAATCAT
CCAAATACATTGGAGGCATTGAAGTTTCTTGGGGAGAAAAACCCAAATAC
TGAGAAGAACAGTCCAGCAGGACTTGTGGGGCTGGAGAGAGGTTCCTTAT
GTTTATGG
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