FC931981

Overview
NameFC931981
Unique NameFC931981
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: WBS22_DICDI (Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.835e-34
Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 1
Query:  361 GCGSGLSGETLSENGHQWIGLDISQPMLSIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            GCGSG+SG+ +++ GH WIG DISQ ML +A++REVE              R G  D AISISA+QWLCNA+K+ H PR RL  FF SL+  L RG +A+ Q YPE+
Sbjct:   58 GCGSGISGDVITDAGHYWIGCDISQHMLDVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFYPEN 164          

HSP 2 Score: 45.4394 bits (106), Expect = 1.835e-34
Identity = 19/26 (73.08%), Postives = 24/26 (92.31%), Query Frame = 2
Query:  269 NRPELIAPPEIFYDDTEARKYTSSSR 346
            +RPE IAPPEIFYDD E++KY+S+SR
Sbjct:    2 SRPEHIAPPEIFYDDVESKKYSSNSR 27          
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: WBS22_MOUSE (Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.520e-33
Identity = 63/113 (55.75%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  343 SYHRHSGCGSGLSGETLSENGHQWIGLDISQPMLSIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            SY    GCGSGLSG+ +SE GH W+G+DIS  ML  AL+R+ E              RPG  DG ISISAVQWLCNA+K S  P  RL  FF SLY  L RGARAV Q+YPE+
Sbjct:   55 SYLLDIGCGSGLSGDYISEEGHYWVGIDISPAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLYPEN 167          

HSP 2 Score: 38.5058 bits (88), Expect = 1.520e-33
Identity = 16/27 (59.26%), Postives = 19/27 (70.37%), Query Frame = 2
Query:  266 ANRPELIAPPEIFYDDTEARKYTSSSR 346
            + RPE   PPE+FYD  EARKY  +SR
Sbjct:    5 SRRPEHSGPPELFYDQNEARKYVRNSR 31          
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: WBS22_HUMAN (Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.259e-32
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 1
Query:  361 GCGSGLSGETLSENGHQWIGLDISQPMLSIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            GCG+GLSG  LS+ GH W+GLDIS  ML  A++RE+E              +PG  DG ISISAVQWLCNA+K S  P  RL  FF SL+  L RG+RAV Q+YPE+
Sbjct:   61 GCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPEN 167          

HSP 2 Score: 40.0466 bits (92), Expect = 1.259e-32
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query:  272 RPELIAPPEIFYDDTEARKYTSSSR 346
            RPE   PPE+FYD+TEARKY  +SR
Sbjct:    7 RPEHGGPPELFYDETEARKYVRNSR 31          
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: WBS22_BOVIN (Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.900e-31
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 1
Query:  361 GCGSGLSGETLSENGHQWIGLDISQPMLSIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            GCG+GLSG+ LS+ GH W+G+DIS  ML  AL+RE +              +PG  D  ISISAVQWLCNA+K S  P  RL  FF SLY  L RG RAV Q+YPE+
Sbjct:   61 GCGTGLSGDYLSDEGHYWVGIDISPAMLDEALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLYPEN 167          

HSP 2 Score: 38.891 bits (89), Expect = 3.900e-31
Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 2
Query:  272 RPELIAPPEIFYDDTEARKYTSSSR 346
            RPEL  PPE++YD  EARKY  +SR
Sbjct:    7 RPELRGPPELYYDKNEARKYVRNSR 31          
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: BUD23_YEAST (Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae GN=BUD23 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.657e-29
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  361 GCGSGLSGETLSENG-HQWIGLDISQPMLSIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            GCGSGLSGE L++ G H W GLDIS  ML+  L RE+E              R G  D AISISA+QWLCNAD + ++P+ RL  FF +LY  L +G + V Q YP++
Sbjct:   55 GCGSGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPKN 162          

HSP 2 Score: 43.5134 bits (101), Expect = 7.657e-29
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  269 NRPELIAPPEIFYDDTEARKYTSSSR 346
            +RPE +APPEIFY+D+EA KYT S+R
Sbjct:    2 SRPEELAPPEIFYNDSEAHKYTGSTR 27          
BLAST of FC931981 vs. ExPASy Swiss-Prot
Match: YAU6_SCHPO (Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe GN=SPAC26A3.06 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-27
Identity = 53/108 (49.07%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  361 GCGSGLSGETLSENGHQWIGLDISQPMLSIALE-REVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPES 681
            GCGSG+S +     GH  +G+DIS  MLS+ALE +E+E              RPG  DG ISISA+QWL NADK  + P+ RL  FF +LY  + RG RAV Q YPE+
Sbjct:   55 GCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPET 162          

HSP 2 Score: 40.817 bits (94), Expect = 4.008e-27
Identity = 17/26 (65.38%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  269 NRPELIAPPEIFYDDTEARKYTSSSR 346
            +RPE IAPPEIFY+D EA KY++++R
Sbjct:    2 SRPEHIAPPEIFYNDVEAGKYSTNTR 27          
The following BLAST results are available for this feature:
BLAST of FC931981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WBS22_DICDI1.835e-3452.34Probable methyltransferase WBSCR22 homolog OS=Dict... [more]
WBS22_MOUSE1.520e-3355.75Uncharacterized methyltransferase WBSCR22 OS=Mus m... [more]
WBS22_HUMAN1.259e-3254.21Uncharacterized methyltransferase WBSCR22 OS=Homo ... [more]
WBS22_BOVIN3.900e-3153.27Uncharacterized methyltransferase WBSCR22 OS=Bos t... [more]
BUD23_YEAST7.657e-2949.07Putative methyltransferase BUD23 OS=Saccharomyces ... [more]
YAU6_SCHPO4.008e-2749.07Putative methyltransferase C26A3.06 OS=Schizosacch... [more]
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Properties
Property NameValue
Genbank descriptionC34203C11EF PostHarveN Citrus clementina cDNA clone C34203C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931981 ID=FC931981; Name=FC931981; organism=Citrus clementina; type=EST; length=682bp
GATCCCTAACCCTAACAATATTGCCGTAACCTTCAAATCTCTAACGCCGG
CCAAATCTGAAGGGCTTGTAACGCCGTCGACCGGTCGCCGTCTTCCTTGC
AGCCTCGCCTGAGCCTCGCGTCGCAGCCTCGCCTGAGCACGTTGCTATCG
CTGCACACTGCAAGCCTTGCTGTCGTTGAAGCTCGCCACACCGCTGTTGC
TGCATGCTTCACCCACGTCACCATCGTCCAAACCTCGCCTGATTGGATCA
TTCGTGCCTGAGATGGCGAACCGACCGGAGTTAATAGCGCCACCTGAGAT
ATTCTATGATGATACTGAAGCTCGGAAATACACGTCCTCTTCTCGTATCA
TCGACATTCAGGTTGTGGATCAGGTCTTAGTGGTGAGACACTATCTGAGA
ACGGGCACCAATGGATTGGTCTAGACATTTCCCAGCCAATGCTTAGTATT
GCTTTGGAGCGAGAGGTTGAGGGCGATCTATTACTTGGAGACATGGGTCA
GGGCTTGGGACTTCGGCCTGGAGTTGTTGACGGGGCCATCAGTATATCGG
CTGTTCAGTGGTTATGTAATGCTGACAAGGCCTCACATGAGCCACGATTA
AGATTGAAGGCTTTCTTTGGGTCATTATATAGATGCTTGGCGAGGGGAGC
AAGAGCAGTATTTCAGATATATCCTGAAAGTG
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