FC931991 | Citrus Genome Database

Overview


Name	FC931991
Unique Name	FC931991
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	118

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig14256	contig	Ccv1_Contig14256:48..165.	BLAST: Citrus Unigene V1 Contigs to TAIR9

Homology

[Close]

BLAST of FC931991 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.070e-15
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = -3

Query:    3 KFEKSKERRLATELGYGFPIGDPWIANGISPWPFASES 116
            KF KSKERRLATELGYGFPIGDPWI +GISPWPFASES
Sbjct:    6 KFSKSKERRLATELGYGFPIGDPWITDGISPWPFASES 43

The following BLAST results are available for this feature:

BLAST of FC931991 vs. ExPASy Swiss-Prot

BLAST of FC931991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
M030_ARATH	5.070e-15	92.11	Uncharacterized mitochondrial protein AtMg00030 OS...	[more]

Properties


Property Name	Value
Genbank description	C34203D12EF PostHarveN Citrus clementina cDNA clone C34203D12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC931991 ID=FC931991; Name=FC931991; organism=Citrus clementina; type=EST; length=118bp
ACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTTTGCGATCCATGG
ATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTT
TGGACTTTTCAAACTTAG