FC931998

Overview
NameFC931998
Unique NameFC931998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.667e-80
Identity = 143/187 (76.47%), Postives = 163/187 (87.17%), Query Frame = 3
Query:   99 DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            DD  AD +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L LFRPD NA R++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAGGVK
Sbjct:   50 DDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVK 235          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.541e-78
Identity = 136/199 (68.34%), Postives = 167/199 (83.92%), Query Frame = 3
Query:   66 NSYSLNCL*QCDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ-LTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            N+ S N       E AD +DWD +GFGL PADYMY MKC+ D  F KG L R+G IE+SPS+GVLNYGQGLFEG+KAYRK+DG  + LFRP++NA R++ GAERMCMP+P+++QF++AV +T LANKRWVPPPGKGSLY+RPLL+G+G +LGLAPAPEYTF+++ SPVGNYFKEG+AP+NL VE+EFHRATPGG GGVK
Sbjct:   62 NAVSSNSSSTLVTELAD-IDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVK 259          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.012e-77
Identity = 128/180 (71.11%), Postives = 157/180 (87.22%), Query Frame = 3
Query:  120 MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            +DWD + FGL P DYMY MKCS D  F +G+L  +G I+++P++GVLNYGQGLFEG+KAYRK+DG + LFRP++NA R++ GAERMCMPSP+++QF++AVK T LANKRW+PPPGKGSLYIRPLL+G+G +LGLAPAPEYTFL+F SPVGNYFKEG+AP+NL VE EFHRATPGG GGVK
Sbjct:   82 IDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGTGAVLGLAPAPEYTFLIFVSPVGNYFKEGVAPINLIVETEFHRATPGGTGGVK 261          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 4.260e-68
Identity = 127/187 (67.91%), Postives = 148/187 (79.14%), Query Frame = 3
Query:   99 DDESADHMDWDNLGFGLTPADYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            D+E AD +DWDNLGF L   D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG++ LFRP+ NA R++ GAERMCM SPS+ QFI+ VKQT LAN+RWVPPPGKGSLY+RPLL GSG  LG+A A EYTFLVF SPV NYFKEG A LNLYVE+   RA  GG GGVK
Sbjct:   46 DEEYAD-VDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAASEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVK 231          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.515e-65
Identity = 116/186 (62.37%), Postives = 147/186 (79.03%), Query Frame = 3
Query:  102 DESADHMDWDNLGFGLTPADYMYTMKC-SNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            DE   ++ W+ LGF LTP DYMY  KC   + F +G++  YG I +SP S +LNYGQGLFEG+KAYR ED ++ +FRPDQNA R+QTGAER+CM  P+++QF++AVKQT LANK+WVPPPGKG+LYIRPLL+GSG  LG+APAPEYTFL++ASPVG+Y K   + LNL V+ ++HRA  GG GGVK
Sbjct:   15 DEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVS-SGLNLKVDHKYHRAHSGGTGGVK 199          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.732e-64
Identity = 115/186 (61.83%), Postives = 141/186 (75.81%), Query Frame = 3
Query:  102 DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            DE   ++ WD LGF L P DYMY  KC   + F  G +  YG I +SP +G+LNYGQGLFEG+KAYR EDG++TLFRPDQNA R+QTGA+R+CM  PS +QF++AVKQT LAN +WVPPPGKG+LYIRPLL+G+G +LG+A APEYTFL++ SPVGNY K   + LNL V+    RA  GG GGVK
Sbjct:   18 DEKYANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHKAS-SGLNLKVDHNHRRAHFGGTGGVK 202          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59
Identity = 105/186 (56.45%), Postives = 137/186 (73.66%), Query Frame = 3
Query:  102 DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            DE   ++ W+ L F     DYMY  KC++ + F++G++  +  ++L+P + VL YGQGL+EG+KAYR EDG++ LFRPDQN  RLQ GA+R+ MP PS+DQF+ A+KQ ALANK+W+PPPGKG+LYIRP+L GSGPILG  P PE TF  FA PVG Y K+  + LNL +ED+F RA P G GGVK
Sbjct:   14 DEKYANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHKDN-SGLNLKIEDQFRRAFPSGTGGVK 198          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 3
Query:  120 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 656
            +DW+NLGF     DY +     +  +++G+L+    + +   S  L+YGQ  FEG+KAYR +DG + LFRP  NA R+Q  A+R+ MP    + F+ A K+   AN+ W+ P G G +LY+RP L+G G  +G+  APE+ F VF  PVG YFK GLAP N ++  ++ RA P G GGVK
Sbjct:    4 LDWNNLGFSYIKTDYRFIAHWKDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKTAPEFIFSVFCCPVGAYFKGGLAPSN-FITTDYDRAAPMGTGGVK 182          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 3
Query:  114 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNL-YVEDEFHRATPGGAGGVK 656
            +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+  LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G  LG+ PA EY F+VF +PVG YFK G+      ++   F RA P G GGVK
Sbjct:    5 ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAPKGTGGVK 187          
BLAST of FC931998 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37
Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 3
Query:  114 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLTLFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNL-YVEDEFHRATPGGAGGVK 656
            +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+  LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G  LG+ PA EY F+VF +PVG YFK G+      ++   F RA P G GGVK
Sbjct:    5 ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFKGGIEKGGARFITTIFDRAAPKGTGGVK 187          
The following BLAST results are available for this feature:
BLAST of FC931998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
BCAT2_ARATH1.667e-8076.47Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT3_ARATH4.541e-7868.34Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH1.012e-7771.11Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT1_ARATH4.260e-6867.91Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT6_ARATH1.515e-6562.37Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH3.732e-6461.83Putative branched-chain-amino-acid aminotransferas... [more]
BCAT4_ARATH4.721e-5956.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HAEIN2.693e-3843.33Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPJ7.835e-3843.72Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPY2.977e-3743.72Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionC34203E07EF PostHarveN Citrus clementina cDNA clone C34203E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931998 ID=FC931998; Name=FC931998; organism=Citrus clementina; type=EST; length=691bp
GATGCAAATGAATGAGTTCTATCTGTAATGCTCTCCATTTATGAATTCTG
TGCCTTGGTTTGAACAACTCCTATAGCTTGAACTGTTTGTAACAATGCGA
CGATGAGAGTGCTGATCATATGGACTGGGATAACCTTGGCTTTGGTCTTA
CACCAGCGGACTACATGTACACCATGAAATGTTCTAACGACTATTTTGAG
AAAGGACGGCTGAGTCGCTATGGAAAGATTGAGTTGAGCCCTTCTTCAGG
AGTCTTAAATTATGGGCAGGGACTCTTTGAAGGTATGAAAGCATACAGAA
AGGAAGATGGGCAACTCACTCTCTTCCGTCCTGATCAAAATGCCACCCGC
TTGCAAACTGGTGCCGAGAGAATGTGCATGCCTTCTCCCTCAATTGATCA
ATTCATTGACGCTGTTAAACAAACTGCTCTTGCCAATAAGCGTTGGGTTC
CTCCTCCTGGGAAAGGGTCTTTGTACATAAGGCCTCTACTTGTCGGAAGT
GGTCCTATATTAGGTTTGGCTCCGGCACCTGAGTACACATTCCTTGTATT
TGCTTCTCCTGTTGGTAACTATTTCAAGGAGGGTTTGGCCCCCTTGAACT
TGTACGTAGAGGATGAATTTCACCGTGCAACTCCTGGTGGAGCTGGAGGC
GTTAAGCCATATCTACTATGCTCCAGTTCTGAAAAGCATAG
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