FC932044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: YAI9_SCHPO (UPF0041 protein C24B11.09 OS=Schizosaccharomyces pombe GN=SPAC24B11.09 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 3 Query: 342 FQRLWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQSDSTVEAAKVIE 659 F+R WN P G KTVHFWAP MKW LV++GI D+AR E LS+ Q AAL TGAIWTRW I++P+N A VNFFL VGAVQV+RI ++QR Q T ++ + E Sbjct: 6 FKRFWNHPAGPKTVHFWAPAMKWTLVLSGIGDYARSPEYLSIRQYAALCATGAIWTRWSLIVRPKNYFNATVNFFLAIVGAVQVSRILVYQRQQKRITAQSEQRTE 111
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: FMP43_YEAST (UPF0041 protein FMP43 OS=Saccharomyces cerevisiae GN=FMP43 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 339 AFQRLWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQSDSTVEAAKVI---EHEAVDSVKATAEAT 701 AF+R WNS G KTVHFWAP +KW LV AG++D RP EK+S QN +L+ T IWTRW F+IKP+N LLA+VNFFLGC +TRI ++ DS + I E A + K TA + Sbjct: 9 AFRRFWNSETGPKTVHFWAPTLKWGLVFAGLNDIKRPVEKVSGAQNLSLLATALIWTRWSFVIKPKNYLLASVNFFLGCTAGYHLTRIANFRIRNGDSFKQVIHYIIKGETPAAVAAKQTASTS 132
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: YHW2_YEAST (UPF0041 protein YHR162W OS=Saccharomyces cerevisiae GN=YHR162W PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26 Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 339 AFQRLWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQSDSTVEAAKVIEHEAVDSVK 683 AF+R W S G KTVHFWAP +KW LV AG SD RP EK+S QN +L+ T IWTRW F+IKPRN+LLA+VN FL Q+ RI ++ DS + I A +S K Sbjct: 9 AFRRFWQSETGPKTVHFWAPTLKWGLVFAGFSDMKRPVEKISGAQNLSLLSTALIWTRWSFVIKPRNILLASVNSFLCLTAGYQLGRIANYRIRNGDSISQLCSYILSGADESKK 123
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: YXX3_CAEEL (UPF0041 protein F53F10.3 OS=Caenorhabditis elegans GN=F53F10.3 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 354 WNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQSD 629 WN G KTV FWAP +KW L+ AG++D ARPA+KLSL QN+AL TGAIWTR+C +I P N L++VNFF+ C G Q+ RI ++ D Sbjct: 31 WNHAAGPKTVFFWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIWTRYCLVITPINYYLSSVNFFVMCTGLAQLCRIAHYRYQNPD 122
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: BR44_HUMAN (Brain protein 44 OS=Homo sapiens GN=BRP44 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 3 Query: 351 LWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQ 623 L+N P G +TV FWAP+MKW LV AG++D ARPAEKLS Q+A LM TG IW+R+ +I P+N L AVNFF+G GA Q+ RI W+ +Q Sbjct: 31 LYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGAAGASQLFRI--WRYNQ 119
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: BR44_RAT (Brain protein 44 OS=Rattus norvegicus GN=Brp44 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 351 LWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQ 623 L+N P G +TV FWAP+MKW LV AG++D ARPAEKLS Q+ LM TG IW+R+ +I P+N L AVNFF+G GA Q+ RI W+ +Q Sbjct: 31 LYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRI--WKYNQ 119
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: BR44_MOUSE (Brain protein 44 OS=Mus musculus GN=Brp44 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 351 LWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQ 623 L+N P G +TV FWAP+MKW LV AG++D ARPAEKLS Q+ LM TG IW+R+ +I P+N L AVNFF+G GA Q+ RI W+ +Q Sbjct: 31 LYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRI--WRYNQ 119
BLAST of FC932044 vs. ExPASy Swiss-Prot
Match: BR44_PONAB (Brain protein 44 OS=Pongo abelii GN=BRP44 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 351 LWNSPVGVKTVHFWAPVMKWCLVVAGISDFARPAEKLSLTQNAALMGTGAIWTRWCFIIKPRNVLLAAVNFFLGCVGAVQVTRIFLWQRSQ 623 L+N P G +TV FWAP+MK LV AG++D ARPAEKLS Q+A LM TG IW+R+ +I P+N L AVNFF+G GA Q+ RI W+ +Q Sbjct: 31 LYNHPAGPRTVFFWAPIMKRGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGAAGASQLFRI--WRYNQ 119 The following BLAST results are available for this feature:
BLAST of FC932044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932044 ID=FC932044; Name=FC932044; organism=Citrus clementina; type=EST; length=705bpback to top |