FC932063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932063 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.230e-33 Identity = 70/119 (58.82%), Postives = 93/119 (78.15%), Query Frame = 2 Query: 314 RRRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAV 670 R GA G +M A+ A SYA AL D+AK+N TLE T+AD+EKIEKI ++ + FFV+P + EKKRE+VDEI SS++QP NFLNIL+D KRV+++K+IVKEFE+VYN +T+TE+AV Sbjct: 52 RGGGAAGSKMVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAV 170
BLAST of FC932063 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.736e-31 Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 2 Query: 209 VSLQQTATLSLQSNLFPSGRAASRNPLSATIPSGPR-----RRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAV 670 +S T + +L S A+ NPL I + + R GA G RM + A+ YA AL D+A TLE+T++DVEK+ +IFSE+ ++ FF NP I I+ KR ++DEI +S LQP T NF+NILID++R+++VK+I+ EFE+V+NK+T TE+AV Sbjct: 21 LSTSSTTSTPKPFSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGTRMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAV 179
BLAST of FC932063 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.696e-29 Identity = 68/155 (43.87%), Postives = 102/155 (65.81%), Query Frame = 2 Query: 215 LQQTATLSLQSNLFPSGRAASRNPLSATIPSGPRRR---GAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAV 670 L + L+L S+ F S + L +P RR GA G RMS+ A SYA AL DLA +NNTL++ +AD +KIE++FS+ ++ ++F +P ++ KR+++ E +S QP T NFLN+LID+KR+D++ DI+KEFE VYN +T+TE+ V Sbjct: 23 LTRKPILNLSSSTFYSPKLK----LKLKLPLTKTRRSTGGALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVV 173
BLAST of FC932063 vs. ExPASy Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 227 ATLSLQSNLFPSG-RAASRNPLSATIPS----GPRRRGAHGIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMA 667 A S S P+ R+AS + +PS PRRRG + A SYA AL ++A N TLE T +D+EK++KIF+++ + EFF NPT+ E+K ++DEI KS LQP NF+N+++D R ++ +IV EFE ++N +T TE+A Sbjct: 17 AAASASSGATPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVA 168
BLAST of FC932063 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 38/106 (35.85%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 353 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMA 667 V+ SYA ALV+LA LE+ ADV+ + + E ++ +NP ++ +KKR ++ +I K + Q T N+LN+L++ R+ +V +I + FE++Y +MT+T++A Sbjct: 38 VSESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVA 143 The following BLAST results are available for this feature:
BLAST of FC932063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932063 ID=FC932063; Name=FC932063; organism=Citrus clementina; type=EST; length=670bpback to top |