FC932097

Overview
NameFC932097
Unique NameFC932097
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC932097_ssr71 microsatellite FC932097_ssr71:71..85. BLAST: Citrus ESTs to Prunus persica proteins V1
FC932097_ssr161 microsatellite FC932097_ssr161:161..175. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15450 contig Ccv1_Contig15450:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.756e-36
Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = 1
Query:  241 EMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGAC 477
            E  S  +YA C  GG +S G TH AV P+DLVKC MQ+DP KYK I +G+ V LKE G +GL KGW PT LGYS QG C
Sbjct:   57 EFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLC 135          

HSP 2 Score: 68.9366 bits (167), Expect = 4.756e-36
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  486 ILRVLQEVLFGHCWPEYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            + +VL   + G    E    ++T +YLA SASAE  A +AL PMEA KVR+QTQPG+A  L D  PK+ K EG
Sbjct:  142 VFKVLYSNMLGE---ENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEG 211          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.069e-36
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 1
Query:  250 SPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGAC 477
            S  F+  C +GG +S G TH A+ P+DLVKC MQ+DP KYKSI +G+ V LKE G +GL KGW PT +GYS QG C
Sbjct:   61 SGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLC 136          

HSP 2 Score: 70.4774 bits (171), Expect = 8.069e-36
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3
Query:  486 ILRVLQEVLFGHCWPEYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            + +VL   + G    E A  ++T +YLA SASAE  A +AL PMEA KVR+QTQPG+A  L D  PK+ K EG
Sbjct:  143 VFKVLYSNMLGE---ENAYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEG 212          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.071e-36
Identity = 49/96 (51.04%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  241 EMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAG 528
            E  S  +YA C  GG +S G TH AV P+DLVKC MQ+DP KYK I +G+ + LKE G +GL KGW PTL+GYS QG C            S+I G
Sbjct:   52 EFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILG 147          

HSP 2 Score: 67.3958 bits (163), Expect = 8.071e-36
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 3
Query:  546 YKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            ++T +YLA SASAE  A +AL PMEA KVR+QTQPG+A  L + +PK+ K EG
Sbjct:  154 WRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLREAVPKMYKEEG 206          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.071e-36
Identity = 49/96 (51.04%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  241 EMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAG 528
            E  S  +YA C  GG +S G TH AV P+DLVKC MQ+DP KYK I +G+ + LKE G +GL KGW PTL+GYS QG C            S+I G
Sbjct:   53 EFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILG 148          

HSP 2 Score: 67.3958 bits (163), Expect = 8.071e-36
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 3
Query:  546 YKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            ++T +YLA SASAE  A +AL PMEA KVR+QTQPG+A  L + +PK+ K EG
Sbjct:  155 WRTSLYLASSASAEFFADIALAPMEAAKVRIQTQPGYANTLREAVPKMYKEEG 207          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.323e-35
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  250 SPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGAC 477
            S  F+  C +GG +S G TH A+ P+DLVKC MQ+DP KYK I +G+ V LKE G +GL KGW PT LGYS QG C
Sbjct:   61 SGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLC 136          

HSP 2 Score: 68.9366 bits (167), Expect = 2.323e-35
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  486 ILRVLQEVLFGHCWPEYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            + +VL   + G    E    ++T +YLA SASAE  A +AL PMEA KVR+QTQPG+A  L D  PK+ K EG
Sbjct:  143 VFKVLYSNMLGE---ENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEG 212          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.146e-31
Identity = 39/88 (44.32%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  211 LVIPAPKEK-IEMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQG 471
            L+ PAP +K +++Y+P +Y  CT+GG ++ G TH A+TP+DL+KC  Q++P  Y    +G+  +L ++G +GL+ G +PTL+GYS QG
Sbjct:    5 LIPPAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92          

HSP 2 Score: 61.2326 bits (147), Expect = 3.146e-31
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 3
Query:  537 AAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQT-QPGFARGLADGLPKLVKSEG 704
            A +Y+T IYLA SASAE++A + LCPMEA+KVRVQT  P FA    +   K+V +EG
Sbjct:  115 AHEYRTSIYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEG 171          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.176e-30
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 1
Query:  235 KIEMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQG 471
            ++E  S  +YA C +GG +S G TH A+ P+DLVKC +Q++P KY  I +G+   + E+GA+ L KGW PTLLGYSAQG
Sbjct:   34 QVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQG 112          

HSP 2 Score: 58.5362 bits (140), Expect = 1.176e-30
Identity = 31/61 (50.82%), Postives = 37/61 (60.66%), Query Frame = 3
Query:  531 EYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEGALG 713
            E A  Y+T +YLA SASAE  A + L PMEA KVR+QT PG    L    P + K+EG  G
Sbjct:  133 ENAYLYRTSLYLAASASAEFFADILLAPMEATKVRIQTSPGAPPTLRGCAPMIYKAEGLTG 193          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.734e-29
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  232 EKIEMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGAC 477
            +  E  S  ++A C +GG +S G TH AV P+DLVKC +Q+D  KYK++ +G+ V ++E+G +GL KGW PT +GYS QG C
Sbjct:   39 DSCEFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLC 120          

HSP 2 Score: 53.1434 bits (126), Expect = 4.734e-29
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 3
Query:  531 EYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPG 653
            E A  Y+T +YLA SASAE  A +AL P+EA KVR+QT PG
Sbjct:  139 ETAYTYRTFVYLAASASAEFFADIALSPLEAAKVRIQTMPG 179          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.067e-24
Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  235 KIEMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKYKSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGA 474
            KI++Y+  FYA CT+GG ++ GPTH ++TP+DLVKC +Q++P  Y S   G+  ++  +G K ++ G+  T +GYS QGA
Sbjct:    9 KIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGA 88          

HSP 2 Score: 46.9802 bits (110), Expect = 1.067e-24
Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 3
Query:  513 FGHCWPEYAAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQ-TQPGFARGLADGLPKLVKSEGAL 710
            F H +  + +   T +YL  SA+AE +A + LCP EA+KV+ Q T P F   + DG  K+    G +
Sbjct:   97 FKHLYSSWLSPGVT-VYLMASATAEFLADIMLCPFEAIKVKQQTTMPPFCNNVVDGWKKMYAESGGM 162          
BLAST of FC932097 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.066e-22
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query:  238 IEMYSPAFYAACTVGGSVSTGPTHMAVTPIDLVKCNMQIDPTKY-KSITSGYGVLLKEQGAKGLFKGWVPTLLGYSAQGA 474
            I  YS + Y    + G++  G TH ++ PID+VK  +Q++PT Y K +   +  ++  +GA  L  G+ PTLLGYS QGA
Sbjct:    9 IPQYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGA 88          

HSP 2 Score: 61.6178 bits (148), Expect = 2.066e-22
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 3
Query:  537 AAKYKTLIYLAGSASAEVIAAVALCPMEAVKVRVQTQPGFARGLADGLPKLVKSEG 704
            A++YK  +Y+  +A AE +A +ALCP+EA ++R+ +QP FA GL  G  +++K EG
Sbjct:  110 ASRYKNSVYMGSAAMAEFLADIALCPLEATRIRLVSQPQFANGLVGGFSRILKEEG 165          
The following BLAST results are available for this feature:
BLAST of FC932097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MPCP_PONAB4.756e-3659.49Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_BOVIN8.069e-3657.89Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_RAT8.071e-3651.04Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_MOUSE8.071e-3651.04Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_HUMAN2.323e-3557.89Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_SCHPO3.146e-3144.32Probable mitochondrial phosphate carrier protein O... [more]
MPCP_CAEEL1.176e-3051.90Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_CHOFU4.734e-2948.78Phosphate carrier protein, mitochondrial OS=Choris... [more]
PIC2_YEAST1.067e-2445.00Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MPCP_YEAST2.066e-2240.00Mitochondrial phosphate carrier protein OS=Sacchar... [more]
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Properties
Property NameValue
Genbank descriptionC34204F03EF PostHarveN Citrus clementina cDNA clone C34204F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932097 ID=FC932097; Name=FC932097; organism=Citrus clementina; type=EST; length=744bp
GATCATTTTATTTATTTGCGTTTTGAGAAATTAAGAGAATCAATGGAACT
CTCTGATCATCATCACCAGAAGCAGCAGCAGCAGCACTACTACTCGTCAT
CGTCTTCATCACCCAAAAGACTTTTCGATTTGTATGCTTTGATGAGTAGT
CAACCACGTCCATCATCATCATCATCACCATCATCTAATGGTGTGTCGAA
CTCGAAGAGTTTAGTGATTCCAGCACCAAAGGAGAAGATCGAGATGTACT
CACCAGCCTTTTACGCCGCGTGTACTGTGGGTGGGAGCGTGAGCACCGGC
CCCACTCACATGGCCGTTACTCCTATCGATCTCGTCAAGTGCAACATGCA
GATTGACCCAACAAAGTACAAGAGCATAACATCTGGATATGGAGTGTTGC
TCAAGGAGCAAGGAGCGAAGGGTCTCTTCAAGGGCTGGGTGCCCACCCTG
CTTGGTTACAGCGCTCAAGGTGCCTGCAAATATGGATTCTACGAGTTCTT
CAAGAAGTATTATTCGGACATTGCTGGCCTGAGTATGCTGCCAAGTACAA
GACCTTGATATACCTCGCCGGCTCGGCATCCGCTGAAGTTATTGCTGCTG
TTGCTCTCTGCCCCATGGAAGCCGTTAAGGTCCGTGTCCAAACTCAGCCT
GGCTTTGCCCGAGGCCTTGCTGACGGGTTGCCCAAGCTTGTGAAGTCTGA
GGGGGCTCTTGGGGTAGTATCGTGATCTATATATGTATATATAT
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