FC932101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTPQL 672 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P + Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNI 193
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-B PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTPQL 672 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P + Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENVNWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNI 193
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTPQL 672 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P + Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSENGNWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNI 193
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15 Identity = 56/197 (28.43%), Postives = 88/197 (44.67%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGF-DSDTPQLNSSXVWEF 696 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ Q W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G DS+T ++E+ Sbjct: 19 SYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSNTAYSGKVQIYEY 202
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_PONAB (Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTP 666 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSP 191
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_HUMAN (Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTP 666 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSP 191
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_BOVIN (Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTP 666 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V++Y D + L W LQ E K SC + ISWNP +G D +P Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHAPMIAVGSDDSSP 191
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_MOUSE (Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 54/186 (29.03%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFDSDTP 666 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ W + + T V DV+F L L +DG V+VY D + L W LQ E V+ SC ISWNP +G D +P Sbjct: 19 SFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHE-------VSCKLCCSC----ISWNPSSSRAHPPMIAVGSDDSSP 191
BLAST of FC932101 vs. ExPASy Swiss-Prot
Match: SEH1_DANRE (Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 52/182 (28.57%), Postives = 81/182 (44.51%), Query Frame = 1 Query: 124 SWNYCGQRLATGSTDGTLSIXXXXXXXXXXXTCNLKTKVHAGAILKVVWVPPEFGDAVVCICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYGLLDPLILKNWQLQAEFQNAIDSVTMFRKASCLSASISWNPQKVENQGSSFVLGFD 654 S+++ G+R+AT S+D ++ + T + KT H+G++ +V W PEFG + D + +WEEIV ++ Q W + + T V DV+F L L +DG V++Y D + L W LQ E K +C + ISWNP +G D Sbjct: 19 SYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKT--HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLAC--SCISWNPSSSRAHPPMIAVGGD 187 The following BLAST results are available for this feature:
BLAST of FC932101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932101 ID=FC932101; Name=FC932101; organism=Citrus clementina; type=EST; length=696bpback to top |