FC932116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.358e-32 Identity = 81/142 (57.04%), Postives = 97/142 (68.31%), Query Frame = 3 Query: 234 MQGVVLNPS-YSR-PHQTLDPPSCSRPASKSTKSFFGERVS--LTRWRNPVCHSSCRLPLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 MQ + LNP+ SR P Q +DP S S + +R + R NP+ R L ++ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+KLQGACGSCPSS MTMKMGIE Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRF-LSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIE 141
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.182e-23 Identity = 67/133 (50.38%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 276 QTLDPPSCSRPA---SKSTKSFFGERVSLTRWRNPVCHSSCRLPLIRKRGAARRN----VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 QT P + A S +T S +V+ W + C SS P R A V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIE Sbjct: 2 QTTTVPMAAAAAVAPSTTTSSSASFKVAAYAWSS--CRSSSS-PATRLVAAPNHQRPPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIE 131
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.729e-20 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3 Query: 471 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 +PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIE 140
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 459 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM MGIE Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIE 141
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 492 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIE 96
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein yutI OS=Bacillus subtilis GN=yutI PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12 Identity = 29/54 (53.70%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 486 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIE Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIE 94
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU_ANASP (Nitrogen fixation protein nifU OS=Anabaena sp. (strain PCC 7120) GN=nifU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 438 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284
BLAST of FC932116 vs. ExPASy Swiss-Prot
Match: NIFU_ANAAZ (Nitrogen fixation protein nifU OS=Anabaena azollae GN=nifU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 438 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 647 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284 The following BLAST results are available for this feature:
BLAST of FC932116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932116 ID=FC932116; Name=FC932116; organism=Citrus clementina; type=EST; length=649bpback to top |