FC932117

Overview
NameFC932117
Unique NameFC932117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length354
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7687 contig Ccv1_Contig7687:1..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.111e-49
Identity = 92/117 (78.63%), Postives = 103/117 (88.03%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            S+EYHQETL+NLR AM+NTG+LCAVML TKGPEIRTGFLKDGKPIQLKQGQEITISTDY +KGDE  ICMSYKKLA DV PG VILC+DGTIS  VL C+ + G V+CRCEN++MLG
Sbjct:   44 SYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCADGTISLKVLSCDKEKGTVRCRCENTSMLG 160          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.157e-49
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            SH+YHQET++NLR AM +TGILCAVML TKGPEIRTGFLKD KP+QLKQGQEITISTDY+IKGDE+MICMSYKKLA DV+P SVILC+DG I+FTVL C+ + GL +CRCEN+A+LG
Sbjct:   55 SHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFTVLSCDKENGLDRCRCENTAVLG 171          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.012e-47
Identity = 89/117 (76.07%), Postives = 102/117 (87.18%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +H+YHQETLNNL+TAM NTGILCAVML TKGPEIRTGFLKDGKPIQLK+GQE+TI+TDY IKGD  MI MSYKKL V ++PG+ ILCSDGTI+ TVL C+  AG V+CRCEN+A LG
Sbjct:   58 THDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLG 174          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.494e-46
Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYHQETL+NL+ AM NT ILCAVML TKGPEIRTGFL DGKPIQLK+GQEIT+STDYTIKG+E MI MSYKKL +D++PG+ ILC+DGTI+ TVL C+  +G V+CRCEN+A LG
Sbjct:   57 THEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDPPSGTVRCRCENTATLG 173          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 2
Query:    5 HEYHQETLNNLRTAMVNT-GILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            HE H   + NL+ A+    G   A++L TKGPEIRTG L+  KPI+L  G  + I TDY+  G+++ I  SY+KL   V+PG+ IL +DG++S  V+EC      V  R  N A++G
Sbjct:   94 HEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSCIACSYEKLPSSVKPGNTILIADGSLSVEVVECG--KDYVMTRVMNPAIIG 208          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.432e-17
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDG-KPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +H+YH + + N+R+AM  TG + A+ML TKGPEIRTG ++D    + L  GQEI + T+    G    I + YK L   V+ G  IL +DG IS ++     + G V CR  N++ LG
Sbjct:   57 THDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLG 174          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.991e-16
Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 2
Query:    2 SHEYHQETLNNLR-TAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENS 340
            S++YHQ  ++N R  A    G   A+ L TKGPEIRTG   D K I +KQG E+ I+TD  Y    D+  + + YK +   + PG +I   DG +SF VLE  V    ++ RC N+
Sbjct:   70 SYQYHQSVIDNAREAAKTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTDEQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEVLEV-VDDKTIRVRCLNN 184          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            H + + NLR  M  TG   A++L TKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  M+ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LG
Sbjct:   43 HGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLG 153          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            H + + NLR  M  TG   A++L TKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  M+ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LG
Sbjct:   43 HGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLG 153          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            H + + NLR  M  TG   A++L TKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  ++ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LG
Sbjct:   43 HGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLG 153          
The following BLAST results are available for this feature:
BLAST of FC932117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KPYC_ARATH4.111e-4978.63Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_TOBAC9.157e-4977.78Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_SOYBN1.012e-4776.07Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU2.494e-4673.50Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYK_EIMTE6.401e-1842.74Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK_DICDI2.432e-1740.68Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_ASPNG5.991e-1640.52Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYK1_ECOLI6.624e-1536.28Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO576.624e-1536.28Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK1_SALTY4.293e-1435.40Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]

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Properties
Property NameValue
Genbank descriptionC34204G11EF PostHarveN Citrus clementina cDNA clone C34204G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932117 ID=FC932117; Name=FC932117; organism=Citrus clementina; type=EST; length=354bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGTCACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGA
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