FC932118

Overview
NameFC932118
Unique NameFC932118
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.030e-63
Identity = 127/206 (61.65%), Postives = 161/206 (78.16%), Query Frame = 3
Query:   69 MAETAKRYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVARGKM-TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            MAE   RYAVVTGAN+GIG+E+ RQLA  G+  VLT+RDE  GLEAVE LK        +++FHQLDVADPA+I S+A+F+++ FGKLDILVNNAGI GI +DA+ L +G  +EG    ++ T+TYE  E+C++ NY G KRMCEA IPLL+LSDS RIVNVSSS+G+L  V +EWAKG+ SDAENLTEER+D+V++Q LND+ EG
Sbjct:    1 MAEETPRYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGILSDAENLTEERIDQVINQLLNDFKEG 206          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.662e-61
Identity = 116/205 (56.59%), Postives = 157/205 (76.59%), Query Frame = 3
Query:   69 MAETAKRYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVA-RGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXE 668
            MAE + RYA+VTG N+GIG+E+ RQLA  G+  +LT+RDEK GLEAVE LK        +++FHQLDV+DP ++ S+A+F+++HFGKLDIL+NNAG+ G+ +D D L +G  +EG      +T+TYE AE+C++ NY G KRMCEA IPLLQLSDS RI+NVSS +G++  + +EWAKG+ SDAENLTE R+D+V++Q LND  E
Sbjct:    1 MAEESPRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQSIVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGILSDAENLTEVRIDQVINQLLNDLKE 205          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.663e-54
Identity = 113/212 (53.30%), Postives = 144/212 (67.92%), Query Frame = 3
Query:   78 TAKRYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI--------------EEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXE 668
            T  R AVVTG NKGIG+E+ +QL+ +G++ VLT RD   GLEAVEKLK+S  +NV+FHQLDV DP   + S+ADFI++ FGKLDILVNNAG+ G S DAD     I              E+  A+  M++TYE AE+CL+ NY G K + E L+PLLQLSDS RIVNVSSS G L YV++E A  +  D + LTEER+D V++  L D+ E
Sbjct:   10 TKMRCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYEKPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKE 221          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.794e-53
Identity = 114/224 (50.89%), Postives = 158/224 (70.54%), Query Frame = 3
Query:   69 MAE--TAKRYAVVTGANKGIGYEVVRQLALNGVITVLTARDEKGGLEAVEKLKH-SGF--DNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT------LSGFI------EEGVARGKMTQT-------YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXE 668
            MAE  T+ RYAVVTG NKGIGYE  RQLA  GV+ VLT+RDEK G+EA+E+LK  S F  ++++FHQLD+ DPA+I S+ + I++ FG+LDIL+NNAGI+G+  + D       L  +I      +E    G  T++       YE  ++C++TNY GAKRM EA IPLLQLS+S RIVNV+SS+GKL  + ++WA  V  DA++LTEE+VD+V++++L D+ E
Sbjct:    1 MAEKTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTDEHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYISIVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTE 224          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23
Identity = 73/197 (37.06%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   93 AVVTGANKGIGYEVVRQLA--LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            A+VTGANKGIG+ +VR L    +G + VLTARDE  G  AV++L+  G  + +FHQLD+ D  +I ++ DF+R  +G LD+LVNNAGI   ++D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TEE +  ++++++ D   G
Sbjct:    8 ALVTGANKGIGFVIVRDLCRRFSGDV-VLTARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADT----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSFVSVNSLKKCSRELQQKFRS--ETITEEELVGLMNKFVEDTKNG 182          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_RAT (Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21
Identity = 71/196 (36.22%), Postives = 111/196 (56.63%), Query Frame = 3
Query:   93 AVVTGANKGIGYEVVRQLALNGV-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            A+VTGANKGIG+ +VR L    +   VLTARDE  G EAV++L+  G  +  FHQLD+ +P +I ++ DF+   +G L++LVNNAGI     D                 T  +  AE  ++TN+ G + +C+ L+P+++     R+VNVSS  SL  L   + E  +   S  E +TEE +  ++++++ D  +G
Sbjct:    8 ALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGL-SPRFHQLDIDNPQSIRALRDFLLQEYGGLNVLVNNAGIAFKVVDP----------------TPFHIQAEVTMKTNFFGTQDVCKELLPIIK--PQGRVVNVSSSVSLRALKSCSPELQQKFRS--ETITEEELVGLMNKFIEDAKKG 182          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_MOUSE (Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21
Identity = 72/202 (35.64%), Postives = 114/202 (56.44%), Query Frame = 3
Query:   78 TAKRYAVVTGANKGIGYEVVRQLA--LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            +++  A+VTGANKGIG+ + R L    +G + VL ARDE+ G  AV+KL+  G  +  FHQLD+ +P +I ++ DF+   +G LD+LVNNAGI    +D                 T  +  AE  ++TN+ G + +C+ L+PL++     R+VNVSS  SL  L     E  +   S  E +TEE +  ++++++ D  +G
Sbjct:    3 SSRPVALVTGANKGIGFAITRDLCRKFSGDV-VLAARDEERGQTAVQKLQAEGL-SPRFHQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFKVNDD----------------TPFHIQAEVTMKTNFFGTRDVCKELLPLIK--PQGRVVNVSSMVSLRALKNCRLELQQKFRS--ETITEEELVGLMNKFVEDTKKG 182          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_PIG (Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20
Identity = 68/198 (34.34%), Postives = 107/198 (54.04%), Query Frame = 3
Query:   87 RYAVVTGANKGIGYEVVRQLALNGV-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS--DAENLTEERVDEVLSQYLNDYXEG 671
            R A+VTGANKGIG+ +VR L        VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G LD+LVNNA I                       T  +  AE  ++TN++G + +C  L+PL++     R+VNVSS+ G  +   +E +  +     +E +TEE +  ++++++ D   G
Sbjct:    6 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGL-SPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAI----------------AFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLIK--PQGRVVNVSSTEG--VRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNG 182          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_PONAB (Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = 3
Query:   93 AVVTGANKGIGYEVVRQLA-LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            A+VTG NKGIG  +VR L  L     VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TEE +  ++++++ D  +G
Sbjct:    8 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITEEELVGLMNKFVEDTKKG 182          
BLAST of FC932118 vs. ExPASy Swiss-Prot
Match: CBR1_HUMAN (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = 3
Query:   93 AVVTGANKGIGYEVVRQLA-LNGVITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYXEG 671
            A+VTG NKGIG  +VR L  L     VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TEE +  ++++++ D  +G
Sbjct:    8 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITEEELVGLMNKFVEDTKKG 182          
The following BLAST results are available for this feature:
BLAST of FC932118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SDR1_ARATH1.030e-6361.65(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SDR2_ARATH3.662e-6156.59Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
SALR_PAPBR5.663e-5453.30Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
MNR1_CAPAN4.794e-5350.89(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
CBR1_BOVIN3.031e-2337.06Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1... [more]
CBR1_RAT2.172e-2136.22Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus ... [more]
CBR1_MOUSE2.172e-2135.64Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cb... [more]
CBR1_PIG2.401e-2034.34Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1... [more]
CBR1_PONAB4.096e-2036.22Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CB... [more]
CBR1_HUMAN4.096e-2036.22Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]

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Properties
Property NameValue
Genbank descriptionC34204H01EF PostHarveN Citrus clementina cDNA clone C34204H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932118 ID=FC932118; Name=FC932118; organism=Citrus clementina; type=EST; length=671bp
TCCTTTGAGTTCTCCCTTCCAATATGTGATGTCTAGGACTCTCGGTTGTG
CTCCACACTTCGTCCTCAATGGCAGAAACAGCTAAGAGGTATGCAGTTGT
TACAGGAGCAAATAAGGGAATTGGGTATGAAGTAGTGAGGCAATTGGCTT
TAAATGGGGTCATTACGGTACTAACAGCCAGAGATGAGAAGGGGGGTCTT
GAAGCTGTTGAAAAACTCAAACACTCTGGCTTTGATAATGTGATCTTTCA
TCAGCTTGATGTTGCAGACCCTGCTGCTATTCACTCTGTAGCTGATTTCA
TTCGAAGTCATTTTGGAAAGCTTGATATTTTGGTAAATAATGCAGGGATT
ACTGGAATCAGTTCGGATGCTGATACTTTGTCAGGTTTTATTGAGGAAGG
TGTTGCAAGAGGAAAAATGACTCAAACTTATGAGTCAGCTGAAAAGTGCC
TGCAAACAAACTACTTGGGGGCCAAAAGAATGTGTGAAGCACTCATTCCT
CTCCTCCAGTTATCCGATTCAGCAAGAATTGTTAATGTATCCTCTTCCTT
GGGAAAGTTGATGTATGTAACACATGAATGGGCCAAAGGAGTGTTTAGTG
ATGCTGAGAACCTCACAGAAGAAAGAGTGGATGAGGTATTGAGCCAGTAT
CTAAATGATTACNAAGAGGGT
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