FC932121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.659e-57 Identity = 116/221 (52.49%), Postives = 143/221 (64.71%), Query Frame = 1 Query: 58 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA + C I+D GF EA+ P E+L VG C +++ KLN P+ E DDDA AIAE M LRHLQL GN L++ GL AILD C +LE LDLR+CFNV Sbjct: 15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNV 230
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.425e-55 Identity = 109/223 (48.88%), Postives = 143/223 (64.13%), Query Frame = 1 Query: 67 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI-----ECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 +W +LP+ +TS+IL ++GAI++L +AQ+VC W R+C DP MWR ID+ N D +DLE MCRHAVDRS+G L+ I+I Y+GT++L+ YIA V C+ I+D+G +A+ P E+L +G CP L++ KLN R P+I DD+AKAIAE+M LRHLQL GN LTN GL AILDGCPHLE LDLRQCFN+ Sbjct: 180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNI 398 HSP 2 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 571 DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 DD+ AIAE M LRHL+LFGN LTN+ L+AILD C HL LDLR+CFN+ Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNI 68
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45 Identity = 99/234 (42.31%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 52 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLES-LDLRQCFNV 720 ++E +W LP ++T++IL ++ D+L +A+++C +W RIC DP MWR I NL D + D E MCRH VD S G LL I+IE+F +D LL YI ++++G I+ P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M LRHLQL GN LTN GL AILDGCPHLE LD+R+CFN+ Sbjct: 34 DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNI 263
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 97/223 (43.50%), Postives = 128/223 (57.40%), Query Frame = 1 Query: 67 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMH---NLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 +W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP MWR ID+ NL + ++ + +E +C AVD S G LL I+I+Y L YIA V C + +G EA P +E L+ VG CP LR+ KLN G +C CD A AIAE M GLRHLQLF N L+ GL AIL+GCPHL++L L QC N+ Sbjct: 20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNI 238
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.676e-41 Identity = 96/233 (41.20%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 28 SRMSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 S++ E++ +W +LP D+ S+IL ++ +++L +A++VC SW R+ DP++WR IDM NL L+ + + +E CRH VD S G LL +I+ F T LL Y+A V I+ G EAI P +E + +G CP L++ KL G E D+DA AIA+ M GL HLQL N LTN+GL AILDGCPHLE LDLRQCFN+ Sbjct: 13 SQLPVMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNI 241
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.383e-40 Identity = 97/238 (40.76%), Postives = 127/238 (53.36%), Query Frame = 1 Query: 55 QESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIDI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 +E +W LP ++T++IL ++ D+L +AQ+VC W RIC DP MWR I N D + D MCRH VD S G LL I++ E+F +D LL YI C+ ++ G AI P + L+A+G CP L++ KLN+ G P +ECDDDA AIAE+M L HLQL N LTN GL AILDGCPHLE LD+R+CF + Sbjct: 41 KERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGM--CFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRI 272
BLAST of FC932121 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 67/247 (27.13%), Postives = 106/247 (42.91%), Query Frame = 1 Query: 52 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPVMWRNIDMHNLGD-------LW--DMDHDLEKMCRHAVDRSNGQLLSIDIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----------RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNV 720 E++ DW L ++ I+S++ ++ T V SWL +C DP +W D+ D LW + + ++ M R VD S G L I + + +D L Y A S N++D + A + + L +G CP LR K N + H CP+ + D +A AI ++M L HL++ + L+ GL +I +GCP LE LDL C ++ Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHL 246 The following BLAST results are available for this feature:
BLAST of FC932121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932121 ID=FC932121; Name=FC932121; organism=Citrus clementina; type=EST; length=722bpback to top |