FC932125

Overview
NameFC932125
Unique NameFC932125
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PUTX_EMENI (Proline-specific permease OS=Emericella nidulans GN=prnB PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.524e-44
Identity = 96/231 (41.56%), Postives = 134/231 (58.01%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIV---DPRA-TGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E   P R IPKA +R  YR+  FYILG+L+IG+ V   DP    G+ SG   A +SPFV+AI NA I  L  +VNA ILI+AWS+GN++C+ GSR + ++  + Q P+IF R N+ GVPYVAV+A W                  F W  N++TV G I W  + + Y+RF  AL+   +  +  P+K P QPY  +      +I+TL  G+ VF  G ++ S+F+ SY
Sbjct:  261 AGEVEAPRRNIPKATKRFIYRVFTFYILGSLVIGVTVAYNDPTLEAGVESGGSGAGASPFVVAIQNAGIGGLNHVVNAAILISAWSSGNAWCYAGSRTLYSLAGEGQAPKIFTRTNRTGVPYVAVLATW-TIGLLSFLNLSSSGQTVFYWFTNITTVGGFINWVLIGIAYLRFRKALQFHGM-LDMLPFKTPLQPYGTYYVMFIISILTLTNGYAVFFPGRFTASDFLVSY 489          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PUT4_SCHPO (Probable proline-specific permease put4 OS=Schizosaccharomyces pombe GN=put4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.934e-42
Identity = 98/231 (42.42%), Postives = 134/231 (58.01%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIV---DPRATGLVS-GSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E+  P R IPKA  R  YR+ FFYI G+L IG+I    DPR    +S G+  A +SPFVI I NA I  L  I+NA IL +A S+GNS+ + GSR I ++  +HQ P+IF   N+ GVP ++ VA                AA  F W  NLST++G +AW  + V Y++F  A+   N+  ET P+K PFQPYA ++      +ITL  GF VF+   ++  NF+A+Y
Sbjct:  262 AGETEAPRRNIPKATSRFIYRLIFFYIFGSLTIGVITSSKDPRLLNAISSGASGAAASPFVIGIQNAEIPVLNHIINAVILTSACSSGNSFLFAGSRSIYSLAKEHQAPKIFKYCNRWGVPVIS-VAVTVLFACLAFLNASASAAVVFNWFCNLSTISGFLAWICVLVAYLQFRKAMILNNL-WETRPYKTPFQPYATYLTLFLLALITLTNGFTVFVGHTFTAGNFIAAY 490          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PUT4_YEAST (Proline-specific permease OS=Saccharomyces cerevisiae GN=PUT4 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.792e-41
Identity = 90/231 (38.96%), Postives = 126/231 (54.55%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIV---DPR-ATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            ++E  D  R I KA+RR  +R+ FFY+LG L I +IV   DP     L  G   A SSPFVI I NA I  LP I+N CIL +AWSA N++ +  +R ++ M    Q P+  GR+NK GVPYVAV  ++               A  F W  N+ST++G + W   C+ Y+RF  A+   N   +  P+K   QPY  W   I   IIT+  G+ +F+   W  ++F+A+Y
Sbjct:  334 SAECADQRRNIAKASRRFVWRLIFFYVLGTLAISVIVPYNDPTLVNALAQGKPGAGSSPFVIGIQNAGIKVLPHIINGCILTSAWSAANAFMFASTRSLLTMAQTGQAPKCLGRINKWGVPYVAVGVSF-LCSCLAYLNVSSSTADVFNWFSNISTISGFLGWMCGCIAYLRFRKAI-FYNGLYDRLPFKTWGQPYTVWFSLIVIGIITITNGYAIFIPKYWRVADFIAAY 562          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: LYP1_YEAST (Lysine-specific permease OS=Saccharomyces cerevisiae GN=LYP1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.890e-38
Identity = 87/227 (38.33%), Postives = 123/227 (54.19%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E+ +P + +P+A  +V +RI  FYI+    IG++V    + L + S    SSPFVI+I NA   ALP I NA +LI   SA NS  +VGSR++ ++      P+ FG V + GVPY+ VV                 A  AF WL+N+ST+AGL AW  + + +IRF  ALK + +SR+  P+KA   PY A+      T+I  + GF  F    +  S F  SY
Sbjct:  329 AGEAANPRKTVPRAINKVVFRIVLFYIMSLFFIGLLVPYNDSRLSASSAVIASSPFVISIQNAGTYALPDIFNAVVLITVVSAANSNVYVGSRVLYSLARTGNAPKQFGYVTRQGVPYLGVVCT-AALGLLAFLVVNNNANTAFNWLINISTLAGLCAWLFISLAHIRFMQALKHRGISRDDLPFKAKLMPYGAYYAAFFVTVIIFIQGFQAFCP--FKVSEFFTSY 552          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: ALP1_YEAST (Basic amino-acid permease OS=Saccharomyces cerevisiae GN=ALP1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 79/227 (34.80%), Postives = 125/227 (55.07%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E+ +P +A+P+A ++V  RI  FYIL    IG++V      L S     +SSPF+I+I N+    LP I NA +LI   SAGNS  ++GSR++ +++ +   P+    V + GVPY +V++                + +AF WLLN++ VAG  AW  +   +IRF  A++K+ +SR+  P+KA   P+ A+       +I L+ GF  F    +   +FVA+Y
Sbjct:  290 AGEAANPRKALPRAIKKVVVRILVFYILSLFFIGLLVPYNDPKLDSDGIFVSSSPFMISIENSGTKVLPDIFNAVVLITILSAGNSNVYIGSRVLYSLSKNSLAPRFLSNVTRGGVPYFSVLST-SVFGFLAFLEVSAGSGKAFNWLLNITGVAGFFAWLLISFSHIRFMQAIRKRGISRDDLPYKAQMMPFLAYYASFFIALIVLIQGFTAFAP-TFQPIDFVAAY 514          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: CAN1_CANAL (Lysine/arginine permease OS=Candida albicans GN=CAN1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35
Identity = 82/219 (37.44%), Postives = 123/219 (56.16%), Query Frame = 2
Query:   26 RAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            RA+  A R+V +RI  FY+L  L +G++V      L    G   +SPF+IA+ N+    LP I NA I+    SAGNS  + GSR++  +      P+ F R NK GVP+ A VA                  +AFTWLLN++  AGLI+W  + V +IRF   L+++ +SR+T P+KA F P++A+ G +   I+ L+ GF VF   +++ S+F  +Y
Sbjct:  288 RALRSAIRKVMFRILVFYVLCMLFMGLLVPYNDPKLTQDGGFTRNSPFLIAMENSGTKVLPHIFNAVIVTTIISAGNSNIYSGSRILYGLAQAGVAPKFFLRTNKGGVPFFA-VAFTAAFGALGYLACSSQGNKAFTWLLNITATAGLISWGFISVSHIRFMKTLQRRGISRDTLPFKAFFMPFSAYYGMVVCFIVVLIQGFTVF--WDFNASDFFTAY 503          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: DIP5_YEAST (Dicarboxylic amino acid permease OS=Saccharomyces cerevisiae GN=DIP5 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 77/229 (33.62%), Postives = 124/229 (54.15%), Query Frame = 2
Query:    5 SESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIV---DPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            SE+ +P +++PKA +   YRI  FY+    L+GM V   DPR       S +A +SPFV+AI N+ I  LP I NAC+L+  +SA NS  +V SR + A+  D + P+IF + ++ GVPY A++ +               +A+ F + +N+ ++ G+++W T+ + YI F  A + Q + +  F + AP Q Y A+       +I L+  F VFL   +    F+  Y
Sbjct:  308 SEAENPRKSVPKAIKLTVYRIIVFYLCTVFLLGMCVAYNDPRLLSTKGKSMSAAASPFVVAIQNSGIEVLPHIFNACVLVFVFSACNSDLYVSSRNLYALAIDGKAPKIFAKTSRWGVPYNALILS-VLFCGLAYMNVSSGSAKIFNYFVNVVSMFGILSWITILIVYIYFDKACRAQGIDKSKFAYVAPGQRYGAYFALFFCILIALIKNFTVFLGHKFDYKTFITGY 535          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: CAN1_YEAST (Arginine permease OS=Saccharomyces cerevisiae GN=CAN1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33
Identity = 79/227 (34.80%), Postives = 120/227 (52.86%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E+ +P +++P+A ++V +RI  FYI   L IG++V      L   +   ++SPF+IAI N+    LP I NA IL    SA NS  +VGSR++  ++ +   P+   R  K GVPY+AV                    + F WLLN++ VAG  AW  + + +IRF  ALK + +SR+  P+KA   P  A+      TII ++ GF  F    ++  +F A+Y
Sbjct:  307 AGEAANPRKSVPRAIKKVVFRILTFYIGSLLFIGLLVPYNDPKLTQSTSYVSTSPFIIAIENSGTKVLPHIFNAVILTTIISAANSNIYVGSRILFGLSKNKLAPKFLSRTTKGGVPYIAVFVT-AAFGALAYMETSTGGDKVFEWLLNITGVAGFFAWLFISISHIRFMQALKYRGISRDELPFKAKLMPGLAYYAATFMTIIIIIQGFTAFAP-KFNGVSFAAAY 531          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: AGP2_YEAST (General amino acid permease AGP2 OS=Saccharomyces cerevisiae GN=AGP2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33
Identity = 80/233 (34.33%), Postives = 119/233 (51.07%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNAN----SSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPY--VAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A E   P + +PKA ++V  R+ F ++   L +G++  P    L +    A     SSP+VIA+ N  I  LP IVN  ++ AA+SAGN+Y +  SR    M  D   P+IF R N+HGVP   VA+   W              +A    WL+NL T + LI +  LC+ Y+ F  A   Q  S    P+++  QPY A +G +  + + L+ G+ VF    W+T +F+ SY
Sbjct:  310 AGEVKRPRKVLPKAFKQVFVRLTFLFLGSCLCVGIVCSPNDPDLTAAINEARPGAGSSPYVIAMNNLKIRILPDIVNIALITAAFSAGNAYTYCSSRTFYGMALDGYAPKIFTRCNRHGVPIYSVAISLVW---ALVSLLQLNSNSAVVLNWLINLITASQLINFVVLCIVYLFFRRAYHVQQDSLPKLPFRSWGQPYTAIIGLVSCSAMILIQGYTVFFPKLWNTQDFLFSY 539          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: GAP1_YEAST (General amino-acid permease GAP1 OS=Saccharomyces cerevisiae GN=GAP1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32
Identity = 82/213 (38.50%), Postives = 116/213 (54.46%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSG-NANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPV 637
            ASESV+P +++PKAA++V +RI  FYIL  L+IG++V      L+  S  +A +SPFVIAI    I  LPS+VN  ILIA  S GNS  +  SR +VA+     LP+IF  V++ G P V  +A                  + F WLL LS ++ L  W  +C+C+IRF  AL  Q    +   +K+P   + ++ G     II  +A F V
Sbjct:  306 ASESVEPRKSVPKAAKQVFWRITLFYILSLLMIGLLVPYNDKSLIGASSVDAAASPFVIAIKTHGIKGLPSVVNVVILIAVLSVGNSAIYACSRTMVALAEQRFLPEIFSYVDRKGRPLVG-IAVTSAFGLIAFVAASKKEGEVFNWLLALSGLSSLFTWGGICICHIRFRKALAAQGRGLDELSFKSPTGVWGSYWGLF-MVIIMFIAQFYV 516          
The following BLAST results are available for this feature:
BLAST of FC932125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PUTX_EMENI3.524e-4441.56Proline-specific permease OS=Emericella nidulans G... [more]
PUT4_SCHPO1.934e-4242.42Probable proline-specific permease put4 OS=Schizos... [more]
PUT4_YEAST2.792e-4138.96Proline-specific permease OS=Saccharomyces cerevis... [more]
LYP1_YEAST2.890e-3838.33Lysine-specific permease OS=Saccharomyces cerevisi... [more]
ALP1_YEAST6.662e-3534.80Basic amino-acid permease OS=Saccharomyces cerevis... [more]
CAN1_CANAL8.701e-3537.44Lysine/arginine permease OS=Candida albicans GN=CA... [more]
DIP5_YEAST5.640e-3433.62Dicarboxylic amino acid permease OS=Saccharomyces ... [more]
CAN1_YEAST2.143e-3334.80Arginine permease OS=Saccharomyces cerevisiae GN=C... [more]
AGP2_YEAST2.799e-3334.33General amino acid permease AGP2 OS=Saccharomyces ... [more]
GAP1_YEAST4.042e-3238.50General amino-acid permease GAP1 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34204H08EF PostHarveN Citrus clementina cDNA clone C34204H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932125 ID=FC932125; Name=FC932125; organism=Citrus clementina; type=EST; length=718bp
CGCATCTGAGTCGGTTGATCCTCATCGTGCTATTCCCAAAGCCGCCCGTC
GTGTGACTTACCGCATTGCCTTCTTCTACATTCTCGGAGCACTTCTCATC
GGCATGATCGTGGACCCAAGAGCCACAGGCCTGGTCTCCGGCTCTGGCAA
CGCGAACAGCTCGCCCTTTGTGATTGCCATCACCAACGCCAGCATCAACG
CTCTGCCCTCGATCGTGAATGCATGCATTCTCATTGCCGCGTGGTCTGCC
GGTAACTCATACTGCTGGGTCGGATCACGCATGATTGTCGCCATGACTAC
AGACCACCAGCTGCCCCAGATCTTCGGCCGCGTAAACAAGCACGGTGTGC
CATATGTGGCTGTCGTCGCCGCCTGGCTCTTTGGGCCGCTGCCGTACCTG
AGTCTCGGTAGCGGTGGCGCAGCGCAGGCATTCACCTGGCTTCTGAACCT
CAGCACGGTTGCCGGTCTGATCGCTTGGGCAACCCTTTGCGTCTGCTACA
TTCGTTTCTATGCCGCATTGAAGAAGCAAAATGTGAGCCGAGAAACTTTC
CCATGGAAAGCACCCTTTCAACCTTATGCCGCATGGGTAGGCTTTATCGG
CTCTACTATCATTACTTTGGTTGCTGGTTTCCCCGTGTTTTTGAAGGGCA
ACTGGAGTACGTCCAACTTCGTTGCATCGTACATCGGTATCCCCATCTTC
ATCGNTCCCATCATTTGC
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