FC932130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens GN=PRPF31 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 92/179 (51.40%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L+ +L +A IMVVSVTASTT G+ L E+ L++ +ACD ++VESRMS+IAPNLS I+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE Sbjct: 155 LQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus GN=Prpf31 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45 Identity = 91/179 (50.84%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L+ +L +A IMVVSVTASTT G+ L ++ L++ +ACD ++VESRMS+IAPNLS I+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE Sbjct: 155 LQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_XENTR (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis GN=prpf31 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44 Identity = 92/179 (51.40%), Postives = 123/179 (68.72%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L+ +L +A IMVVSVTASTT G+ L ++ L++ +ACD ++VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L+GFS+ + GY+ ++I QS PP L +A RL++AK TLAARVDS G G +EEI +K +KWQE Sbjct: 154 LQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKCTLAARVDSFHESSEGKVGYDLKEEIERKFDKWQE 332
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_XENLA (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis GN=prpf31 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44 Identity = 92/179 (51.40%), Postives = 123/179 (68.72%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L+ +L +A IMVVSVTASTT G+ L ++ L++ +ACD ++VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L GFS+ + GY+ +EI QS P L +A RL++AK TLA+RVDS +P G G +EEI +K +KWQE Sbjct: 154 LQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSAKCTLASRVDSFHENPEGKIGYDLKEEIERKFDKWQE 332
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_DANRE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Danio rerio GN=prpf31 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44 Identity = 90/179 (50.28%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L+ +L +A IMVVSVTASTT G L +D LQ+ +ACD ++VESRMS+IAPNLS IVG++ AAK+MG AGGL+ L+KMPACN+ LLGA+++ L+GFS+ + GY+ ++ Q+ PP LR +A RL++AK TLA+RVDS G G +EEI +K +KWQE Sbjct: 166 LQQILTNATIMVVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQTLPPDLRRKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIERKFDKWQE 344
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_SCHPO (Pre-mRNA-processing factor 31 OS=Schizosaccharomyces pombe GN=prp31 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.465e-36 Identity = 82/206 (39.81%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXMKE 632 LPSA +MV++ TA+TT GKPLP++ ++ + C+ ++V+SR+S +APNLSA+VGS AA L+G AGGL+ L K PACN+ LG ++ G + G+L +EI Q TPP +R +A R+ AAK LAAR+DS P G+ G S R+E+ +KIEK E D P MKE Sbjct: 183 LPSATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSRISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRLTTIGINNPAVSGDYGFLYMSEIVQKTPPDVRKQAIRMTAAKVALAARIDSIHEYPDGSFGISARKEVERKIEKLLEPPSQKPTVALPVPDDRPKRRRGGRRIRKMKE 388
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_USTMA (Nucleolar protein 58 OS=Ustilago maydis GN=NOP58 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 51/177 (28.81%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 12 LLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS-----TRGDPSG-TAGRSFREEIHKKI 524 +LP I + A + G + E L+ CD+ ++++RM+ IAPNL+A+VG V A+L+ AG L LAK PA VQ+LGA+K T + G + + + P L+ + R++A K+ L+ R+D+ T+ D T G R ++ ++ Sbjct: 236 ILPEEIEETLKAAAEISMGTEISETDLEHIWSLCDQVISITQYRTQLYQYLQNRMAAIAPNLTALVGDLVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHSSLVGQAPQKLKGKMARMVATKAALSIRLDALADADTKSDEGAPTVGIEARAKLESRL 412
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: YZVL_CAEEL (Uncharacterized NOP5 family protein K07C5.4 OS=Caenorhabditis elegans GN=K07C5.4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 156 DFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 527 ++++ RM + AP+LSA++G V A+L+ AG L+ LAK PA VQ+LGA+K T ++ + G L + + R R LA K ++AARVD P T G R+++ ++E Sbjct: 289 EYIKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLE 412
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_MACFA (Nucleolar protein 58 OS=Macaca fascicularis GN=NOP58 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 49/179 (27.37%), Postives = 83/179 (46.37%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L LLP + V A + G + E+ + + C + +++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+K + + G + + T P + + R+LAAK+ LA R D+ D S G R ++ ++ ++ Sbjct: 222 LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_HUMAN (Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 49/179 (27.37%), Postives = 83/179 (46.37%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 539 L LLP + V A + G + E+ + + C + +++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+K + + G + + T P + + R+LAAK+ LA R D+ D S G R ++ ++ ++ Sbjct: 222 LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400 The following BLAST results are available for this feature:
BLAST of FC932130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932130 ID=FC932130; Name=FC932130; organism=Citrus clementina; type=EST; length=688bpback to top |