FC932136

Overview
NameFC932136
Unique NameFC932136
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11095 contig Ccv1_Contig11095:84..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.785e-27
Identity = 67/176 (38.07%), Postives = 100/176 (56.82%), Query Frame = 1
Query:   55 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GPAEFHKSLPEGFYISRWQEPGRAEADFGRYDAKT 567
            CSP  + + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+ A+A  GFR +A D +GYG S  P E E+   + +  +++  L+ LGI +   +  D+     +  AL HPERV  V +L  P +PP     P E  +S+P   Y   +QEPG AEA+  +  ++T
Sbjct:  230 CSP--NDVSHGYVTVKPGIRLHFVEMGSGP-AICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27
Identity = 66/176 (37.50%), Postives = 101/176 (57.39%), Query Frame = 1
Query:   55 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GPAEFHKSLPEGFYISRWQEPGRAEADFGRYDAKT 567
            C+P  + + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+ A+A  GFR +A D +GYG S  P E E+   + +  +++  LD LGI +   +  D+     +  AL +PERV  V +L  PF+PP     P +  +S+P   Y   +QEPG AEA+  +  ++T
Sbjct:  230 CNP--NDVSHGYVTVKPGIRLHFVEMGSGP-ALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26
Identity = 65/168 (38.69%), Postives = 95/168 (56.55%), Query Frame = 1
Query:   55 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GPAEFHKSLPEGFYISRWQEPGRAEAD 543
            C P    + H Y+ ++ G+ LH  E G+GP  V   HGFPE W+SWR+Q+ A+A  GFR +A D +GYG S  P E E+   + +  D++  L+ LG+++   +  D+G    +  AL +PERV  V +L  PF+P      P E  K+ P   Y   +QEPG AEA+
Sbjct:  232 CDPSA--LSHGYVLIKPGVRLHFVEMGSGP-AVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFQEPGVAEAE 396          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 1
Query:   55 CSPKMDKIEHKYIKVQG-LNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GPAEFHKSLPEGFYISRWQEPGRAEADFGRYDAKT 567
            C+P    + H Y+ V+  + LH  E G+GP  V   HGFPE WYSWR+Q+ A+A  G+R +A D +GYG S  P E E+   + +  +++  LD LG+++   +  D+G    +  AL +PERV  V +L  PFIP      P E  K+ P   Y   +QEPG AEA+  +  ++T
Sbjct:  232 CNPS--DMSHGYVTVKPRVRLHFVELGSGP-AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRT 404          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 1
Query:   67 MDKIEHKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP-------FIPPGPAEFHKSLPEGFYISRWQEPGRAEADFGRYDAKTVVRNI 582
            MD ++ +++   G+ LHVA  G   GP ++V LHGFPE WY W++Q+  +   G+R IAPD RGY LSD P   +      + +D++  +      K  ++  D+G   A+  A   PE +  +I + +P         P  P ++ KS     YI+ +Q P   EA     D  T+ + I
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGP-LIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKS----SYIAYFQLPDIPEASLRENDYDTLDKAI 176          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.515e-18
Identity = 57/158 (36.08%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   82 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP-------FIPPGPAE-FHKSLPEGFYISRWQE 522
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWRHQ+    +  +R +A D RGYG SD PA  E      +  D+   LD LG +K  L+  D+G   A+L A+ +PE +  +I +  P       +I   PA+ F  S    F I R+ E
Sbjct:   69 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPAQLFRSSFYYFFQIPRFPE 225          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   82 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP-------FIPPGPAEFHKSLPEGFYISRW 516
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWR+Q+    +  +R +A D RGYG +D P   +      +  D+   LD LG +K  L+  D+G   A+L A+ +PE V  +I +  P       +I   PA+  KS    F+   W
Sbjct:   71 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHPNVFTEYILRHPAQLLKSSYYYFFQIPW 224          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   79 EHKYIKVQ--GLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGPAEFHK---SLPEGFYISRW 516
            +H YI+++  G+  H   +G   N +++ LHGFPE WYSWR+Q+   +  G+R +A D RG+G SD P+  E    + +  DL   +  LG ++  LV  D+G   A+ FA+ H + V+ +I +  P     P+ FH    S P   + SR+
Sbjct:   74 QHGYIRMKDSGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFS-NGYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPH----PSAFHDYVLSHPSQLFSSRY 220          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   91 IKVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 450
            +K  GL LH    G G   +++FLHGFPE W+SWR+Q+    +  F  +A D RGY  SD P E +      + +D+  T+  LG +K  LV+ D+GA  A+ F++ +P  V  ++    P
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP 206          
BLAST of FC932136 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 1
Query:   79 EHKYI--KVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVAVAAGGFRAIAPDYRGYGLSDPPAEPEKAPFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSG-VITLGVP 450
            EH ++  K  GL LH    G G   +++FLHGFPE W+SWR+Q+    +  F  +A D RGYG SD P + +      +  D+   +  LG +K  LVA D+GA  A+ F++ +P  V   V+  G P
Sbjct:   74 EHGFLNLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAP 200          
The following BLAST results are available for this feature:
BLAST of FC932136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HYES_RAT1.785e-2738.07Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE3.977e-2737.50Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
HYES_PIG1.974e-2638.69Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_HUMAN1.974e-2638.07Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
YFHM_BACSU8.033e-2031.49AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX4_MOUSE1.515e-1836.08Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN4.873e-1733.55Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR8.312e-1734.21Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
EPHX3_MOUSE7.780e-1536.36Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX3_HUMAN2.264e-1437.50Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC34205A07EF PostHarveN Citrus clementina cDNA clone C34205A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932136 ID=FC932136; Name=FC932136; organism=Citrus clementina; type=EST; length=723bp
GACCCATACTCTTTGTCTTCATAAACCTTAACATAAACAGCAGTGCGCAG
GATTTGCTCTCCAAAAATGGACAAAATTGAGCACAAGTACATCAAAGTAC
AAGGCCTGAACCTTCACGTCGCCGAGACAGGAACAGGTCCAAATGTCGTG
GTGTTTTTGCATGGGTTCCCCGAGATATGGTACTCTTGGCGCCATCAGAT
GGTGGCTGTAGCCGCTGGTGGCTTCAGGGCTATTGCGCCTGATTACAGAG
GCTACGGCCTCTCTGACCCACCTGCTGAACCCGAAAAGGCCCCCTTTAAA
GACATCACTAATGATCTCCTCGCCACTTTAGATCACCTCGGAATTAACAA
GGTTTTTCTTGTTGCAAAAGATTTTGGAGCCCGGCCTGCCTACTTGTTTG
CACTTCTACACCCAGAGAGGGTCTCCGGTGTTATTACATTAGGAGTGCCG
TTTATACCTCCAGGTCCTGCTGAATTTCACAAATCCCTTCCTGAAGGCTT
CTACATATCGAGATGGCAGGAACCTGGACGAGCAGAAGCTGATTTTGGTC
GCTATGATGCCAAGACTGTGGTGAGAAACATTTACATTCTTTTCTCCAGA
AGTGAAATACCAATNAGCACCTGAAACAAGGAGATCATGGATTTGGTGGA
TGCTTCTACTCCTCTTCCCCTTGGCTCACAGAGGAAGATCTTGCTACTTA
TGGAGCTTTGTACGAGAGTCTGG
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