FC932167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.664e-36 Identity = 74/122 (60.66%), Postives = 96/122 (78.69%), Query Frame = 2 Query: 329 QFSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALS-SGYQRFSLSTIRLLMFLFKNPHDSL-RIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPPSV 688 QFS+Y F P THP+++RSFE DR+RSGF++E+EL+QALS SGY S TIRLL+F++K P DSL R+GPKE+ +LW+CL QWRAIF RYDRDRSGK++ +LRDA Y++G +P SV Sbjct: 41 QFSSYS-GMFSPETHPEIVRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSV 161
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31 Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 332 FSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALSSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPPSVL 691 F++ SAFPPGT P+++ F+ DRD SGFID+ ELQ ALSS Q FS+ T+ LLM+LF N + +IGPKEF L+ L WR+IFER+D+DRSG+ID ELRDAL S+G++V P +L Sbjct: 153 FASLVPSAFPPGTDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTN-SNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVIL 271
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30 Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 2 Query: 332 FSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALSSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPPSVL 691 F++ S F PGT P+++ F+ D+D SGFID+ ELQ ALSS QRFS+ T+ LLM+LF N + +++IGPKEF L+ L WR+IFER D+DRSG+ID+ ELRDAL S+G++V P VL Sbjct: 172 FASLIPSGFAPGTDPNIVACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSN-AMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVL 290
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 329 QFSAYGHSA----FPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPP 682 Q +YG A PPG P+ F+ VD D SG+I EL+QAL ++ + F+ T ++M +F + +S RI F+ LW + QWR +F++YDRDRSG I+ EL AL +GY + P Sbjct: 97 QHGSYGQGAPAGNIPPGVDPEAFSWFQTVDTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMF-DKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQALCQMGYQLSP 218
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 341 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPP 682 YG PP P+ F+ VD D SG+I EL+QAL +S + F+ T +++ +F RI F+ LW L QWR +F++YDRDRSG I EL+ AL +GY + P Sbjct: 97 YGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSG-RIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGYNLSP 210
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PEF1_RAT (Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 341 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPP 682 YG PP P+ F+ VD D SG+I EL+QAL +S + F+ T +++ +F RI F+ LW L QW+ +F++YDRD SG I EL+ AL +GY + P Sbjct: 105 YGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKTG-RIDVVGFSALWKFLQQWKNLFQQYDRDHSGSISSTELQQALSQMGYNLSP 218
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 341 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPP 682 YG PP P+ F+ VD D SG+I EL+QAL + + F+ T +++ +F RI F+ LW + QW+ +F++YDRDRSG I EL+ AL +GY + P Sbjct: 106 YGQGGAPPNVDPEAYSWFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFDKTKSG-RIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSP 219
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 359 PPGTHPDVIRSFEMVDRDRSGFIDENELQQALSS-GYQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYAVPPSVL 691 PPG +P+ + F VD D+SG+I+ EL+QAL + F+ T +++ +F R+ F+ LW+ L QWRA F+++DRDRSG I+ E+ AL +GY + P + Sbjct: 98 PPGVNPEAYQWFSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSG-RVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGYNLSPQFI 208
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 392 FEMVDRDRSGFIDENELQQALSSG-YQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 670 F+ VD+DRSG I +NELQQALS+G + F+ T+R ++ +F + + + EF +W + W+ +F YDRD SG ID EL+ AL GY Sbjct: 32 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKA-GVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY 124
BLAST of FC932167 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 392 FEMVDRDRSGFIDENELQQALSSG-YQRFSLSTIRLLMFLFKNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 670 F+ VD+DRSG I + ELQQALS+G + F+ T+R ++ +F + + + EF +W + W+ +F YDRD SG ID EL+ AL GY Sbjct: 32 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKA-GVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY 124 The following BLAST results are available for this feature:
BLAST of FC932167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932167 ID=FC932167; Name=FC932167; organism=Citrus clementina; type=EST; length=693bpback to top |