FC932197

Overview
NameFC932197
Unique NameFC932197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length497
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC932197_ssr401 microsatellite FC932197_ssr401:401..410. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15470 contig Ccv1_Contig15470:1..497. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932197 vs. ExPASy Swiss-Prot
Match: PPA29_ARATH (Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 3.539e-55
Identity = 99/137 (72.26%), Postives = 111/137 (81.02%), Query Frame = 1
Query:    1 YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKQRE 408
            Y WIK SQQFWF++TS RL+R Y +KP  Q+  APGL YFHIPLPEF  FD  N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LCYGGGFGYHAYGKAGWERRARVVV  L K+R+
Sbjct:  214 YDWIKTSQQFWFDRTSKRLKREYNAKPNPQEGIAPGLAYFHIPLPEFLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGFGYHAYGKAGWERRARVVVVDLNKKRK 350          
BLAST of FC932197 vs. ExPASy Swiss-Prot
Match: PPA14_ARATH (Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.435e-42
Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 1
Query:    1 YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSN-FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEK 399
            Y W+K SQQ W+E TS  L+  +   P  Q + APGLVY HIP+PEFA F++S   TGVRQE   S  +NSGFFT +V  G+VK VF+GHDHVNDFC  L GI LCY GG GYH YG+ GW RR RVV A LEK
Sbjct:  216 YDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPGLVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEK 349          
BLAST of FC932197 vs. ExPASy Swiss-Prot
Match: PPA28_ARATH (Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.889e-32
Identity = 69/138 (50.00%), Postives = 86/138 (62.32%), Query Frame = 1
Query:    1 YGWIKPSQQFWFEQTSAR--LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKQRE 408
            YGWIK SQ  W + TS +   QR +++ PA        L +FHIP+ E      + F G  QEG++ + V SG   T V+ G+VKA F GHDHVNDFCG L G+  CYGGGFGYHAYG+  W RRARV+ A L K R+
Sbjct:  232 YGWIKESQLRWLQDTSIQGHSQRIHVNPPA--------LAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGKGRD 361          
The following BLAST results are available for this feature:
BLAST of FC932197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA29_ARATH3.539e-5572.26Probable inactive purple acid phosphatase 29 OS=Ar... [more]
PPA14_ARATH3.435e-4259.70Probable inactive purple acid phosphatase 14 OS=Ar... [more]
PPA28_ARATH1.889e-3250.00Probable inactive purple acid phosphatase 28 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC34205F09EF PostHarveN Citrus clementina cDNA clone C34205F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932197 ID=FC932197; Name=FC932197; organism=Citrus clementina; type=EST; length=497bp
TATGGTTGGATCAAACCCTCTCAGCAGTTTTGGTTCGAGCAAACTTCTGC
CAGACTTCAGAGGGCATACATGAGCAAGCCAGCAGCTCAGAAAGCACCTG
CACCAGGGCTGGTTTACTTTCACATCCCATTGCCTGAATTTGCATATTTT
GATCAATCAAACTTCACAGGTGTGAGGCAAGAAGGCATAAGCTCTGCTTC
TGTGAACTCAGGCTTCTTCACAACCATGGTTGCAGCAGGGGATGTGAAGG
CTGTTTTCACAGGCCATGATCATGTCAATGATTTCTGTGGCCGGCTTACT
GGTATACAACTCTGTTATGGTGGGGGTTTTGGATACCATGCCTATGGAAA
GGCTGGATGGGAGAGGAGGGCAAGGGTGGTTGTAGCCAGTTTGGAGAAAC
AGAGAGAGAGGCTGGGGAGATGTCAGTCAAATCAACATGGAAGCGCCTGA
TGATGACACCTACTGGTGTGATGTCATGTCTCTGGAGTAAGACTCTC
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