FC932207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.763e-61 Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 MSKRGRGG+AGNK +M+LGLPV A +NC DN+GA+NLYIISVKGI RLNRLP+A VGDMVMATVKKGKP+LRKKVMPAVVVRQ KPWRR DG+F+YFEDNAGVIVNAKGEMKGSAITGP+GKE A+LWPRIAS + ++ Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG++G K +++LGLPVGAV+NC DN+GA+NLYIISVKGI RLNRLPAAGVGDMVMATVKKGKPELRKKV PAVV+RQ K +RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60 Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 MSKRGRGG +GNK +M+LGLPV A +NC DN+GA+NLYIISVKGI RLNRLP+A VGDMVMATVKKGKP+LRKKV+PAV+VRQ KPWRR DG+F+YFEDNAGVIVN KGEMKGSAITGP+GKE A+LWPRIAS + ++ Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.408e-60 Identity = 110/139 (79.14%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 MSKRGRGG+AG K +++LGLPVGAV+NC DN+GA+NLY+I+V GI RLNRLPAAGVGDM +ATVKKGKPELRKKVMPAVV+RQ KP+RR DG+FLYFEDNAGVIVN KGEMKGSAITGPV KE A+LWPRIASN+G + Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 1.264e-59 Identity = 109/133 (81.95%), Postives = 122/133 (91.73%), Query Frame = 3 Query: 63 GAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 GA G K +++LGLPVGA+MNC DNSGARNLYII+VKG G+RLNRLPAA +GDMVMATVKKGKPELRKKVMPA+VVRQ+K WRR DG+FLYFEDNAGVI N KGEMKGSAITGPVGKE A+LWPR+ASNSGVV+ Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137 The following BLAST results are available for this feature:
BLAST of FC932207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932207 ID=FC932207; Name=FC932207; organism=Citrus clementina; type=EST; length=697bpback to top |