FC932275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56 Identity = 102/189 (53.97%), Postives = 130/189 (68.78%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK 654 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWR 195
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 9.944e-56 Identity = 102/189 (53.97%), Postives = 130/189 (68.78%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK 654 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWR 195
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 2.215e-55 Identity = 101/189 (53.44%), Postives = 130/189 (68.78%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK 654 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGGCDN +K+WK Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWK 195
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.779e-55 Identity = 103/189 (54.50%), Postives = 129/189 (68.25%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK 654 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+WK Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWK 195
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.344e-52 Identity = 97/194 (50.00%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 82 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCDNTVKVWK 654 M Q +++GHED VHD DYYGK LAT SSD IKI VG QHL L GH+G VW+VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LAC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P++++ +G CDN +K++K Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFK 193
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.486e-51 Identity = 106/227 (46.70%), Postives = 134/227 (59.03%), Query Frame = 1 Query: 88 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-----------------------GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV------------GSGFLDPVQKLCSGGCDNTVKVWK 654 P+ IET HED VHD +D+YGKRLAT SSD ++K+ + N T A+ L GH+G VW+VAWAHP FG ILASCS+DG V+IWK+ ++ W IK+H H +SVNSI WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ +G V++ S GCDNTVK+W+ Sbjct: 18 PKNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWE 241
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.903e-49 Identity = 95/189 (50.26%), Postives = 129/189 (68.25%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS-----NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV-GSGFLDPVQKLCSGGCDNTVKVW 651 +GH+D +HD MDYYG+RLAT SSD +IKI + ++ + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E +S + W + F H +SVN + WAPHELG LAC SSDG++SV R D W T +I AH +GV SVSWAP+ APG+++ + +++ +GG DN VK+W Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIW 194
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.538e-48 Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW 651 ++T H+D +HD +DYYGKRLAT SSD +IK+ + NN L L GH G VW++ WAHPKFG+ILAS S+DG VI+W+E G + DH H++SVN++ WAPHE G LAC SSDG +SV + DG DT RI AH G +V W+P + G++VG +KL + GCDN VK+W Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHT--AHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIW 186
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48 Identity = 96/193 (49.74%), Postives = 126/193 (65.28%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ--KLCSGGCDNTVKVW 651 +GH++ +HD +DYYG+RLAT SSD +IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ APG+L+ S P Q + +GG DN +K+W Sbjct: 9 SGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISSN-PGPGQQRRFVTGGSDNLLKIW 198
BLAST of FC932275 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.900e-47 Identity = 94/192 (48.96%), Postives = 125/192 (65.10%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN--------SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG-FLDPVQKLCSGGCDNTVKVW 651 +GH+D +HD +DYYG+RLAT SSD +IKI + +T + + L GH+G VW V WAHPKFG+ILAS S+DG V+IW+E + S W K F H +SVN I WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ +PG+LV S + ++ +GG DN +K+W Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLVSSNPGIGQQRRFVTGGSDNLLKIW 199 The following BLAST results are available for this feature:
BLAST of FC932275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932275 ID=FC932275; Name=FC932275; organism=Citrus clementina; type=EST; length=657bpback to top |