FC932323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_MOUSE (Structure-specific endonuclease subunit SLX1 OS=Mus musculus GN=Giyd1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.464e-27 Identity = 64/158 (40.51%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 184 FFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKIKLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKVQVRSMDELPCYTERDEV 654 FF YLL PR++G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL I+GFP+ V+AL+FEWAWQHP S + +S + A +++ ML +P W L +T+ + + CP P HM + P +R V Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDF--RHELCPAPPAHMPIAFGPPPPQPLVPKRPAV 165
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_RAT (Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus GN=Giyd1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27 Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 184 FFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKIKLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV 603 FF YLL PR++G Y+GFTVNP RR+RQHN G + GA RT R PW+MVL ++GFP+ V+AL+FEWAWQHP S + +S + +++ ML +P W L +TV + + CP P HM + Sbjct: 10 FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRWLRPDF--RHELCPAPPPHMPI 148
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_BOVIN (Structure-specific endonuclease subunit SLX1 OS=Bos taurus GN=GIYD1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 184 FFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKIKLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHM 597 FF YLL L PR++G Y+GFTVNP RR++QHNG + GA RT R PWEMVL ++GFP+ V+AL+FEWAWQHP S + + + A +++ ML P W L +T+ + + CP P HM Sbjct: 6 FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLRWLRADF--RQDLCPPPPPHM 142
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_XENLA (Structure-specific endonuclease subunit slx1 OS=Xenopus laevis GN=giyd1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 178 KGFFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKIKLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV---QVRS 615 +GF+ YLL P+YKG YIGFTVNP RRI+QHNG + + GA +T R PW+MVL ++GFP +++AL+FEWAWQHP S + K S + + ML + W L +T+ + +Y + P HM + QVR+ Sbjct: 6 EGFYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLIVHGFPNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPLTLRWLRQEYRRELPLLLQPPLHMPLAFGQVRA 155
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_HUMAN (Structure-specific endonuclease subunit SLX1 OS=Homo sapiens GN=GIYD1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25 Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 184 FFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHNG-EIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKIKLAYTMLNLPNWESLNITVNY 540 FF YLL L PRY+G Y+GFTVN RR++QHNG + GA RT R PWEMVL ++GFP++V+AL+FEWAWQHP S + + + A +++ ML P W L +T+ + Sbjct: 13 FFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRW 132
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_NEMVE (Structure-specific endonuclease subunit SLX1 homolog OS=Nematostella vectensis GN=v1g174298 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 181 GFFACYLLTSLCPRYKGHTYIGFTVNPRRRIRQHNGEI-RCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFS-GVANKIKLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV 603 GF YLL + P++KGHTYIG+TVNP RRI+QHNG + + GA +T +++PW M+L ++GFP ++ ALQFEWAWQ P S ++ AA K V ++ +L + W L + + + +Y P HM V Sbjct: 9 GFHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVHGFPNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLHIRWLMREYEMEFDPRCLPPFHMTV 151
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_DROME (Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila melanogaster GN=CG18271 PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23 Identity = 64/155 (41.29%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 184 FFACYLLTS--LCPRYKGHTYIGFTVNPRRRIRQHNGEIRC---GAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKI----------KLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV 603 F+ YLL S L PRY+G Y+GFTVNP+RRIRQHN + C GA +T ++ PW MV+ ++GFP N ALQFEWAWQ P SL+ R K + + K+ ++ ML + W L +TV + T Y + S LP+HM++ Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHN--LGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP--SLSTR-----LKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPLTVRWLETDYERPFSKA--LPKHMEI 166
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_DROSE (Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila sechellia GN=GM10768 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.873e-23 Identity = 64/155 (41.29%), Postives = 87/155 (56.13%), Query Frame = 1 Query: 184 FFACYLLTS--LCPRYKGHTYIGFTVNPRRRIRQHNGEIRC---GAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKI----------KLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV 603 F+ YLL S L PRY+G Y+GFTVNP+RRIRQHN + C GA +T ++ PW MV+ ++GFP N ALQFEWAWQ P SL+ R K + + K+ ++ ML + W L +TV + T Y + S LP HM++ Sbjct: 23 FYGVYLLCSQSLDPRYRGKCYVGFTVNPKRRIRQHN--LGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP--SLSTR-----LKMYPELKRKLPRETFFDYNFRILSHMLGVGPWNRLPLTVRWLETDYERPFSK--TLPNHMEI 166
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_ANOGA (Structure-specific endonuclease subunit SLX1 homolog OS=Anopheles gambiae GN=AGAP002259 PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 169 DQRKGFFACYLLTSLCP--RYKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVAN---KIKLAYTMLNLPNWESLNITVNYFSTKYSK 561 ++ + F+ YLL S P ++ G TYIG+TV+P RRI+QHN GE GA RT R PW MVL ++GFP N+SAL+FEWAWQ P S +++ K +N ++ ML + W L + V +F+ ++ + Sbjct: 5 EEIEDFYGVYLLVSKSPNPKFAGRTYIGYTVDPNRRIKQHNRGEDAGGARRTSNRGPWTMVLIVHGFPNNISALRFEWAWQQPRVSRRLKQMPELQKKLRKESNFEYNFRILTEMLRMGPWNRLPLVVRWFADEFHR 141
BLAST of FC932323 vs. ExPASy Swiss-Prot
Match: SLX1_DROMO (Structure-specific endonuclease subunit SLX1 homolog OS=Drosophila mojavensis GN=GI23768 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 157 QKAKDQRKGFFACYLLTS--LCPRYKGHTYIGFTVNPRRRIRQHN-GEIRCGAVRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPMESLAVRRAAATFKSFSGVANKI----------KLAYTMLNLPNWESLNITVNYFSTKYSKHSSSCPNLPEHMKV 603 ++A Q+ F+ YLL S + R++G Y+GFTVNP+RRIRQHN G GA +T K+ PW+MV+ ++GFP + ALQFEWAWQ P +L+ R K F + K+ ++ ML + W L +TV + T Y + LP HM++ Sbjct: 12 REALAQKGHFYGVYLLCSQSVDVRHRGKCYVGFTVNPKRRIRQHNRGSSFGGAKKTSKKGPWQMVMIVHGFPNKIVALQFEWAWQQP--TLSTR-----LKIFDDLRRKLPRETHFDYNFRIVNRMLGVGPWHRLPLTVRWLETDYEREFQL--PLPRHMRI 164 The following BLAST results are available for this feature:
BLAST of FC932323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932323 ID=FC932323; Name=FC932323; organism=Citrus clementina; type=EST; length=752bpback to top |