FC932346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 5.394e-90 Identity = 164/193 (84.97%), Postives = 176/193 (91.19%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVI 637 MATRL FEN+CEVGVFSKLTNA+CLVAIGGSE+FYSTFE EL D IPVVKTSI G RIIG NKNGLL+PHTTTDQELQHLRN LPD VVVQRIEE+LSALGNCIACND+VAL HTDLD+ETEE+IADVLGVEVF QT+AGNILVGSYC+ +N+GGLVHPHTSIEDLDELSTL QVPLVAGTVNRGSEVI Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 193
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 3.496e-89 Identity = 160/210 (76.19%), Postives = 179/210 (85.24%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R FEN+CEVG F+KLTNA+CLVAIGGSE+FYS FE EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+L QVPLVAGTVNRGSEVI AG VNDW AFCG DT Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.735e-88 Identity = 158/210 (75.24%), Postives = 178/210 (84.76%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R FEN+CE+G F+KLTN +CLVAIGGSE+FYS FE EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RNSLPD V ++R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+L QVPLVAGTVNRGSEVI AG VNDW AFCG DT Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 3.272e-87 Identity = 156/210 (74.29%), Postives = 176/210 (83.81%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R FEN+CE+G F+KLTN++CLVAIGGSE+FYS FE EL IPVV SI G RIIGR+CVGN++GLL+P+ TTDQELQH+RN LPD V ++R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQTVA +LVGSYC FSN+GGLVHP TSIED DELS+L QVPLVAGTVNRGSEVI AG VNDW AFCG DT Sbjct: 1 MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.582e-87 Identity = 155/213 (72.77%), Postives = 179/213 (84.04%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDTRQP 697 MATR FENS E+GVFSKLTN +CLVA+GGSE+FYS FEAEL D IP+V T+I G RIIGR+ GN+ GLL+P TTDQELQHLRNSLPD V +QR+EERLSALGN I CND+VAL H D+DRETEE+I+DVLGVEVFRQT++GNILVGSYCS SN+GGLVHP TS++D +ELS+L QVPLVAGTVNRGS V+GAG VND+ A G DT P Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAP 213
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.796e-85 Identity = 153/210 (72.86%), Postives = 178/210 (84.76%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R FENS E+GVFS LTN++ LVA+GGSE+FYS FEAEL DV+PVV T+IGG RIIGRL GN+ GLL+P +TTD ELQHLRNSLPD V +QR++ERLSALGN +ACND+VAL H D++RETEEIIADVL VEVFRQTVAGN+L GSYC+ SN+G LVHP TSI++ DELS+L QVPLVAGT+NRGS+VIGAG VNDW AF G DT Sbjct: 1 MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 309.686 bits (792), Expect = 9.853e-84 Identity = 152/210 (72.38%), Postives = 178/210 (84.76%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R+ FEN+ ++GVF+KLTN +CLVAIGGSE+FYS FEAEL D IPVV ++GG RIIGRL VGN+NGLL+P++TTD+ELQHLRNSLPD V + R+EERLSALGN IACND+VAL H DLD+ETEEIIADVL VEVFRQT+A N LVGSY SN+GG+VHP TSI+D DELS+L QVPLVAGTVNRGSEV+ AG VNDW +F G +T Sbjct: 1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVNDWLSFVGMNT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 8.341e-83 Identity = 152/210 (72.38%), Postives = 173/210 (82.38%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MATRL +ENSC+VGVF KLTN +CLV GS+ F T E L D IPVV+TSI G RI+GRL GNKNGLLLP+T TDQELQ +RNSLPD VVVQRIEE+ SALGNCIA ND+VAL H D+DRETEEIIADVLGVEVFRQTV+GN+LVG+YC+ +N+G LVHP TSI D DELS+L QVPLVAGTVNRG+E + AG VNDWTA G+DT Sbjct: 1 MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVNDWTAIVGADT 210
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.573e-81 Identity = 149/212 (70.28%), Postives = 180/212 (84.91%), Query Frame = 2 Query: 59 MATRLMFENS-CEVGVFSKLTNAFCLV-AIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MATRL ++N+ CE+GVFSKLTNA+CLV A S +F++ +E++L VIP+V TSIGG+ IG LCVGNKNGLLL HT TDQELQHLR+SLPD+VVVQRIEE + ALGN IACND+VAL H L+++TEEII+DVLGVEV+RQT+A N LVGSYCS SN GG+VH +T++E++ EL+ L QVPLVAGTVNRGS+VI AG TVNDWTAFCGSDT Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAGLTVNDWTAFCGSDT 212
BLAST of FC932346 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.565e-71 Identity = 128/210 (60.95%), Postives = 164/210 (78.10%), Query Frame = 2 Query: 59 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELTDVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLSQVPLVAGTVNRGSEVIGAGFTVNDWTAFCGSDT 688 MA R+ +E S +VGVF LTN++CLV +GG+++FYS EAEL+D+IPVV TSI RI+GRL VGN++GLL+P+ TTDQELQHLRNSLPD+V ++R++ERLSALGN IACNDHVA+ H ++ ETE+ + +VL VEVFR ++A N LVGSYC S+ G LV T E E++ L Q+P+VAGT NRGSE+IGAG VNDW AFCG D+ Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGAGMVVNDWVAFCGLDS 210 The following BLAST results are available for this feature:
BLAST of FC932346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932346 ID=FC932346; Name=FC932346; organism=Citrus clementina; type=EST; length=705bpback to top |